DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and ZNF544

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001374339.1 Gene:ZNF544 / 27300 HGNCID:16759 Length:769 Species:Homo sapiens


Alignment Length:416 Identity:128/416 - (30%)
Similarity:181/416 - (43%) Gaps:110/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICA 204
            |..:|.:|...|.|.:.|..|.:|||.|:||:|..|.|:||..|.|..|.:|||||||:.|..|.
Human   460 KPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKPYECTHCG 524

  Fly   205 KDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGS 269
            |.|.|...|:.|.:||                 ||....:.:|..:::.|::..|...:| ::|.
Human   525 KSFSQSYELVTHKRTH-----------------TGEKPFKCTQCGKSFSQKYDLVVHQRT-HTGE 571

  Fly   270 YSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTG 334
                      ||::|::|.:.|.|.|.|..|:|.|...|||:|..|.|||...:.|..|::||||
Human   572 ----------KPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHTG 626

  Fly   335 DKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLT 399
            :|||.|::|...|.|...|..|.:|||                                |.:...
Human   627 EKPYDCTHCGKSFSQSYQLVAHKRTHT--------------------------------GEKPYE 659

  Fly   400 SGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTI 464
            ........:.||    ||..|..:|                                        
Human   660 CNECGKAFNRST----QLIRHLQIH---------------------------------------- 680

  Fly   465 NMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGE 529
                  ..::|:.|:.|.:.|::.|.||.|.:|||||||::|..|...|...:.|.:|.:||:||
Human   681 ------TGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFSGSSNLLSHHRIHSGE 739

  Fly   530 KPYNCSFCPKQFRQKSTLQNHLRVHT 555
            |||.||.|.|.|||:|.|..|.|.||
Human   740 KPYECSDCGKSFRQQSQLVVHRRTHT 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
zf-H2C2_2 157..181 CDD:463886 12/23 (52%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 36/84 (43%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:463886 12/23 (52%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 14/23 (61%)
C2H2 Zn finger 534..554 CDD:275368 11/19 (58%)
ZNF544NP_001374339.1 KRAB 68..127 CDD:214630
C2H2 Zn finger 410..428 CDD:275368
zf-H2C2_2 424..445 CDD:463886
C2H2 Zn finger 436..456 CDD:275368
COG5048 460..>753 CDD:227381 120/402 (30%)
C2H2 Zn finger 464..484 CDD:275368 6/19 (32%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368 4/20 (20%)
C2H2 Zn finger 576..596 CDD:275368 8/19 (42%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 5/23 (22%)
C2H2 Zn finger 688..708 CDD:275368 7/19 (37%)
C2H2 Zn finger 716..736 CDD:275368 5/19 (26%)
C2H2 Zn finger 744..764 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

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