DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Zkscan5

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_057892.2 Gene:Zkscan5 / 22757 MGIID:107533 Length:819 Species:Mus musculus


Alignment Length:490 Identity:137/490 - (27%)
Similarity:195/490 - (39%) Gaps:117/490 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICA 204
            |..:|..|...:.|...|..|.::||.|:||||:.|.||||..|.|..|..:|:||:|:.||.|.
Mouse   367 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCNECG 431

  Fly   205 KDFRQQSTLINHIKTH------KAAESSTPTSLLNYQPQTG--------SGK----------HRK 245
            |.|.:.|.||.|:|.|      :.::..:..:.||.:...|        ||:          |.:
Mouse   432 KSFGRHSHLIEHLKRHFREKSQRCSDRRSKNTKLNIKQIPGLSEADLELSGEVQRNACQAEGHSE 496

  Fly   246 SQMHQAYQQ-----------QHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHN 299
            ...||..||           ..:|...::..|....|||..    :|.||:.|.:.|.|.:.|..
Mouse   497 GCEHQDGQQGVVMKETLGQSSSKRTDCNEFSYVHKKSSPGE----RPHQCNECGKSFIQSAHLIQ 557

  Fly   300 HERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQI 364
            |.|.|...||::||.|.||::|...|..|.::|||:|||.|..|...||.:|.|..|...|:.: 
Mouse   558 HRRIHTGEKPFRCEECGKSYNQRVHLTQHHRVHTGEKPYACHLCGKAFRVRSHLVQHQSVHSRE- 621

  Fly   365 APGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTAN------------IIQL 417
            .|......|.|.|..:....|.                   .||....:            .:.|
Mouse   622 RPFKCNECGKGFGRRSHLAGHL-------------------RLHSRDKSHQCHECGEIFFQYVSL 667

  Fly   418 DHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQ 482
            ..|.:||.  |..:..:.:...|.             |..:||   |...|.:..::|:.|..|.
Mouse   668 LEHQVLHV--GQKSEKNGICEEAY-------------SWNLTV---IKDKKLELQEQPYQCDSCG 714

  Fly   483 RFFSQQSTLVNHIKTHTGEKPYKCKICEVN----------------------------FRQVATL 519
            :.||..|.|:.|.:||:.|||.||..|..:                            |...:.|
Mouse   715 KAFSYSSDLIQHYRTHSAEKPQKCDACRDSTCQCPHIKQQQKSCPSGKSHQCNECGRGFSLKSHL 779

  Fly   520 NNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVH 554
            :.|.:|||||||..|..|...|....:|..|||.|
Mouse   780 SQHQRIHTGEKPLQCKECGMSFSWSCSLFKHLRSH 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:290200 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 9/19 (47%)
zf-H2C2_2 185..209 CDD:290200 11/23 (48%)
C2H2 Zn finger 200..220 CDD:275368 10/19 (53%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-C2H2_8 287..363 CDD:292531 31/75 (41%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
zf-H2C2_2 491..515 CDD:290200 11/51 (22%)
C2H2 Zn finger 506..526 CDD:275368 5/47 (11%)
zf-H2C2_2 519..543 CDD:290200 12/23 (52%)
C2H2 Zn finger 534..554 CDD:275368 7/19 (37%)
Zkscan5NP_057892.2 SCAN 47..155 CDD:128708
SCAN 47..134 CDD:280241
KRAB 220..251 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..263
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..340
COG5048 323..744 CDD:227381 119/418 (28%)
C2H2 Zn finger 343..363 CDD:275368
zf-H2C2_2 355..380 CDD:290200 3/12 (25%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
zf-H2C2_2 383..406 CDD:290200 11/22 (50%)
C2H2 Zn finger 399..419 CDD:275368 9/19 (47%)
C2H2 Zn finger 427..447 CDD:275368 10/19 (53%)
zf-C2H2 540..562 CDD:278523 8/21 (38%)
C2H2 Zn finger 542..562 CDD:275368 7/19 (37%)
zf-H2C2_2 554..579 CDD:290200 11/24 (46%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
zf-H2C2_2 582..605 CDD:290200 10/22 (45%)
C2H2 Zn finger 598..618 CDD:275368 7/19 (37%)
C2H2 Zn finger 626..646 CDD:275368 4/38 (11%)
C2H2 Zn finger 654..674 CDD:275368 2/19 (11%)
C2H2 Zn finger 710..730 CDD:275368 7/19 (37%)
C2H2 Zn finger 766..786 CDD:275368 3/19 (16%)
zf-H2C2_2 778..802 CDD:290200 11/23 (48%)
C2H2 Zn finger 794..814 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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