DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Y111B2A.10

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_499640.1 Gene:Y111B2A.10 / 176678 WormBaseID:WBGene00013734 Length:430 Species:Caenorhabditis elegans


Alignment Length:316 Identity:72/316 - (22%)
Similarity:122/316 - (38%) Gaps:83/316 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QEVQSVIS--------EEEVVVDDPRKKKQ-------CHVCKNKFRQLTTLRNHMKIHTDE---- 167
            :|:||:|.        |::..::|...|..       |.:|...|.....|    :||||:    
 Worm   111 KELQSLIRMSQSQWKVEQKQQLEDSLLKPHTAGSIFTCVMCSKAFPNAEAL----QIHTDQVHDL 171

  Fly   168 --RPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAES----- 225
              ..::||.|.||:::...|..|:.:|.  |...|:.|:..|:.:.:|.:||..|...::     
 Worm   172 SRLKHRCKLCGKAYKRKKNLDAHMALHL--KEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEV 234

  Fly   226 -STPTSLL-NYQPQTGSGKHRKSQMHQAYQQQHQRV----QISK--------------TLYSGSY 270
             ..|.|:. ...|.|      ..:.|:.|.:..:::    ::||              |:...|:
 Worm   235 WKAPCSICKELFPST------SVKTHEWYCKNREKIIEKQRVSKILKVQSLPSSPALSTVSYASF 293

  Fly   271 SSPAAEELVKPF-----QCSVCKRRFPQLSTLHNH-ERTHIDPK------------------PYK 311
            ||.....:..|.     .|.||...|....::..| .|.|.|.|                  ||.
 Worm   294 SSCQPGPITSPVSYRDKSCQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYISAESPKHPYA 358

  Fly   312 CETCDKSFSQLATLANHK-KIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAP 366
            |..|.|.|:.:..|:.|| ::|:....:.|:.||..:...|.|..|:|....:.||
 Worm   359 CIECGKRFTTVTALSTHKARVHSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 4/19 (21%)
zf-H2C2_2 157..181 CDD:290200 10/29 (34%)
C2H2 Zn finger 172..192 CDD:275368 7/19 (37%)
zf-H2C2_2 185..209 CDD:290200 7/23 (30%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 6/20 (30%)
zf-C2H2_8 287..363 CDD:292531 24/95 (25%)
C2H2 Zn finger 312..332 CDD:275368 7/20 (35%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 478..498 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:290200
C2H2 Zn finger 534..554 CDD:275368
Y111B2A.10NP_499640.1 C2H2 Zn finger 148..169 CDD:275368 8/24 (33%)
zf-C2H2_8 151..221 CDD:292531 20/75 (27%)
C2H2 Zn finger 178..198 CDD:275368 7/19 (37%)
C2H2 Zn finger 204..224 CDD:275368 6/19 (32%)
C2H2 Zn finger 312..333 CDD:275368 6/20 (30%)
C2H2 Zn finger 359..380 CDD:275368 7/20 (35%)
C2H2 Zn finger 388..409 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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