DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and szy-5

DIOPT Version :9

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_491745.2 Gene:szy-5 / 172281 WormBaseID:WBGene00016154 Length:603 Species:Caenorhabditis elegans


Alignment Length:526 Identity:110/526 - (20%)
Similarity:165/526 - (31%) Gaps:188/526 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 CKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQS 211
            |..:....|.....||.....:.|.|..|:|..:..|.:|.|::.||||||..|:||...|.|..
 Worm    48 CLYRRNDPTNRSYRMKKRPPAQIYHCVQCNKHIKYPSKITEHIRKHTGEKPNVCSICNISFSQAH 112

  Fly   212 TLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAE 276
            ||    |||                                .|||                  |.
 Worm   113 TL----KTH--------------------------------MQQH------------------AH 123

  Fly   277 ELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDK---SFSQLATLANHKKIHTGDKPY 338
            |  ||::||.|...|..:...:.||..|:. .|...||.::   :.||...:|.........:.|
 Worm   124 E--KPYKCSFCTAEFLNVYEKNEHEEQHMH-HPNHGETMEENNATTSQFIQVAEPTIQAEPCQIY 185

  Fly   339 TCS-YCHMQFRQQSTLTNHLK-THTHQIAPGGVGGAGGGGG--------------------AVTA 381
            .|| .|..|..:::.:..|:. ||..|....|:......|.                    ..|.
 Worm   186 ECSEMCGFQSYEEAEVVEHMTVTHYQQTVQNGLILQDFNGEPEPIYEFYEEQYVQQVPTEIEETP 250

  Fly   382 TV------------DH--SMPAPLAPGTQQLTSG----------------LLPNNLHGSTANIIQ 416
            |:            :|  :.|.|..|..|.:..|                .|...:....|||..
 Worm   251 TIKQQSIPYENLHFEHVEAAPGPSEPHLQVVAEGEILYDGEEIVDISNGKSLKEEIQNGDANIYG 315

  Fly   417 L--------------------------------------DHHPLLHFLDGSTTVSSVVATAAANT 443
            :                                      |||      :.:.....::..|:...
 Worm   316 MIQDLEEEVEDIGNEDEERERVRIMVNPNPPKRGTKSLRDHH------EATAATMEMIVDASILE 374

  Fly   444 KVE---HFQAGGSPSGRMTVVGTINMLKGDNPD---------------------RP--FGCSVCQ 482
            ..|   |.:.|..|..:....|.    :.:|.|                     :|  ..|..|.
 Worm   375 LAEPSRHLKQGYPPISKRKNTGK----RAENLDWIIDAVAKGVDVSEASPHHRKKPTLHKCEYCG 435

  Fly   483 RFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSF--CPKQFRQKS 545
            |.....|.:..|::|||||||:||:||.:.|.|...:..|::.|..:|||.|..  |.::|...:
 Worm   436 RVDKYPSKIRAHMRTHTGEKPFKCEICGMAFSQKTPMRLHLRRHFDQKPYECDVDGCKERFVSGA 500

  Fly   546 TLQNHL 551
            .|:.|:
 Worm   501 ILKMHV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 4/16 (25%)
zf-H2C2_2 157..181 CDD:290200 6/23 (26%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
zf-H2C2_2 185..209 CDD:290200 12/23 (52%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-C2H2_8 287..363 CDD:292531 19/80 (24%)
C2H2 Zn finger 312..332 CDD:275368 5/22 (23%)
C2H2 Zn finger 340..360 CDD:275368 5/21 (24%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
zf-H2C2_2 491..515 CDD:290200 13/23 (57%)
C2H2 Zn finger 506..526 CDD:275368 6/19 (32%)
zf-H2C2_2 519..543 CDD:290200 8/25 (32%)
C2H2 Zn finger 534..554 CDD:275368 5/20 (25%)
szy-5NP_491745.2 C2H2 Zn finger 73..93 CDD:275368 6/19 (32%)
C2H2 Zn finger 101..121 CDD:275368 11/55 (20%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
zf-H2C2_2 445..468 CDD:372612 13/22 (59%)
C2H2 Zn finger 459..479 CDD:275368 6/19 (32%)
C2H2 Zn finger 487..506 CDD:275368 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I3033
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

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