Protein Alignment CG4360 and Clamp

DIOPT Version :10

• Sequence 1: NP_650879.1
• Gene: CG4360 / 42413
• FlyBaseID: FBgn0038787
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: XP_061517712.1
• Gene: Clamp / 1279795
• VectorBaseID: AGAMI1_013779
• Length: 611
• Species: Anopheles gambiae
• Alignment Length: 551
• Identity: 119/551 - (21%)
• Similarity: 180/551 - (32%)
• Gaps: 206/551 - (37%)

  Fly    45 SGPGPNSGQQQPTTLASLQQSPFALHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTTANSGGG 109
            |..|.|.||.|.....:|..:|       ..|.:||...|.....|...
Mosquito   178 SETGQNLGQIQIVATEALDPAP-------QQQQLQHAQEQQQQQQQQQQ---------------- 219

  Fly   110 GGGSHTPISPMKQEVQSVISEEEVVVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTD--ERPYKC 172
                    ...:.:.|:....::......:::.|....:.:.:|:||       ||.  ::..||
Mosquito   220 --------QQQQAQAQAQAQAQQQAQQQAQQQAQQQAQQQQQQQVTT-------HTTKADKSQKC 269

  Fly   173 KHCDKAFRQISTLTNHVKIHT-----GEKPFTCNIC-----AKDFRQQSTLI-----NHIK---- 218
            ..|:.            .||:     |.|...|..|     |:...:.:|.|     ..||
Mosquito   270 ISCNG------------PIHSNPKRKGPKLIRCETCISNDGAQPVSRSTTQIFVAPDGDIKFEIG 322

  Fly   219 --THKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQI------------------SK 263
              .:.:..:|:..||:..|......:|.......|:..:.:.:..                  .|
Mosquito   323 EIPNASNSNSSMDSLMPGQMHPIKAEHALVPQQNAHPVKKRNLATVTKCNKCNGSGVIIVGGQKK 387

  Fly   264 TLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANH 328
            .:.|..:..|.     |||.|:.|..||.:.|:|.:|::.|...|.|||..|..:|::...|.||
Mosquito   388 LIQSSMHQQPE-----KPFTCNTCGGRFSRYSSLWSHKKLHTGEKNYKCNVCGIAFAKAVYLKNH 447

  Fly   329 KKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAP 393
            .:||||:|||.|..|.|||.|...|.||.:||
Mosquito   448 MRIHTGEKPYKCGTCGMQFSQSPHLKNHERTH--------------------------------- 479

  Fly   394 GTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRM 458
                                                                         ||
Mosquito   480 -------------------------------------------------------------SG-- 481

  Fly   459 TVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHM 523
                          ::|:.|.||.:.|::.:||.||.:.|||||||||..|:..|.|.|.|.||.
Mosquito   482 --------------EKPYVCEVCDKGFARHATLWNHRRIHTGEKPYKCNRCQSAFSQAAHLKNHE 532

  Fly   524 KIHTGEKPYNCSFCPKQFRQKSTLQNHLRVH 554
            |:|:|.||:.|..|...|..:..|:.|..:|
Mosquito   533 KVHSGLKPFKCDICSAAFADRFALKRHRGIH 563

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4360	NP_650879.1	C2H2 Zn finger	144..164	CDD:275368	3/19 (16%)
		zf-H2C2_2	157..181	CDD:463886	5/25 (20%)
		C2H2 Zn finger	172..192	CDD:275368	2/19 (11%)
		C2H2 Zn finger	200..220	CDD:275368	7/35 (20%)
		zf-C2H2_8	281..366	CDD:464935	37/84 (44%)
		C2H2 Zn finger	284..304	CDD:275368	7/19 (37%)
		C2H2 Zn finger	312..332	CDD:275368	6/19 (32%)
		zf-H2C2_2	325..349	CDD:463886	15/23 (65%)
		C2H2 Zn finger	340..360	CDD:275368	9/19 (47%)
		C2H2 Zn finger	478..498	CDD:275368	8/19 (42%)
		C2H2 Zn finger	506..526	CDD:275368	9/19 (47%)
		zf-H2C2_2	519..543	CDD:463886	11/23 (48%)
		C2H2 Zn finger	534..554	CDD:275368	5/19 (26%)
Clamp	XP_061517712.1	None