DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42668 and osbpl11

DIOPT Version :9

Sequence 1:NP_001189250.2 Gene:CG42668 / 42412 FlyBaseID:FBgn0261550 Length:990 Species:Drosophila melanogaster
Sequence 2:NP_001025662.1 Gene:osbpl11 / 595054 XenbaseID:XB-GENE-947934 Length:731 Species:Xenopus tropicalis


Alignment Length:676 Identity:190/676 - (28%)
Similarity:280/676 - (41%) Gaps:195/676 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 IYKSQKT---KSSHWVGTVMLTSCQVIE-----------------------------RPSKKDGF 299
            :||.:.|   :..|||..:.:.:....|                             |||:....
 Frog   119 LYKLRATDAKERQHWVSRLQICTQHHTEAIGKNNPPLKSRSFSLASQGSGNSPGSQRRPSQNAAS 183

  Fly   300 CFKLFH-------------------PLEQSIWAPRGPDKETIGAVVQPLPTA---------YLIF 336
            .|.|.|                   .:.:.:....|..::.:.: ::.||:|         .|:.
 Frog   184 FFNLGHHRMVPANRRAQLLQPDHLGDVREMMSKAEGQQRDLMRS-IEGLPSAGHLSSLDQDLLML 247

  Fly   337 RAPSQAAGKCWMDALELSLRCSALLLRSNSSTGTAPTSSYIGEPLPVSHETQWSEADYE--KHFN 399
            :|.|.|...|..|..::..:....|.|....||||               ..|.||..:  .|.|
 Frog   248 KATSMATLSCLNDCFQMLHQQHIALQRHIPPTGTA---------------INWLEAKIQIPNHLN 297

  Fly   400 -------------DHDLDADSQNEAPNAVMSGLESESESDPAEPAQDDVVDQQCVETSYVPFTEE 451
                         :.:|..::|..:.:.:.||       :|.:...:|.|:..|      ...|:
 Frog   298 NGEESGLALPESQEQELLRETQALSDSTLASG-------EPEDINPEDEVEDGC------DLKED 349

  Fly   452 EFGEQGEQVEELAEENKSLIWCIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADL---L 513
            |.|        ..||.:|:|..::.|::.||||::|||||||||.||.|:..:|...|.||   :
 Frog   350 ELG--------AVEEQRSVILHLLSQLKLGMDLTRVVLPTFILEKRSLLEMYADFLSHPDLFLSI 406

  Fly   514 SKAVQEDDAFTRMKLVVQWYLSSFYKKPKG--LKKPYNPILGERFRCYWQHPSGSRTF------- 569
            |..:..::   ||...|::||:||::..||  .|||||||:||.|.|.|:.|..|...       
 Frog   407 SAGLTPEE---RMVRFVEYYLTSFHEGRKGALAKKPYNPIIGETFHCSWRVPKDSLQLSNPTEKP 468

  Fly   570 ----------------------YIAEQVSHHPPVSAFYVTNREDGFSITCSILAKSKFYGNSTSA 612
                                  ::|||||||||||.||....|....:...|..||||.|.|...
 Frog   469 PKAQDQAPLVEDSNKPDSYTIRFVAEQVSHHPPVSGFYAECPERRMCVNTHIWTKSKFMGMSIGV 533

  Fly   613 VLEGAATMTLLPRGECYTATTPYAHCKGILMGTLS-MELGGKINIECENTGYRTELEFKLKPFLG 676
            .:.|...:.||..||.||.|.|.|:.:.||  |:. :|||||:|:.|..:||...:.|..|||.|
 Frog   534 TMIGEGVLYLLEHGEEYTFTLPCAYARSIL--TVPWVELGGKVNVNCAKSGYSAAITFHTKPFYG 596

  Fly   677 GA----------DATNVVVGKIKLGKETLATINGHWDKECRVKDSKTGEETVLFKVDAETRSKRL 731
            |.          :|||.||.|::          |.|:.......|           ..||||..|
 Frog   597 GKLHRVTGEVKHNATNSVVCKVQ----------GEWNSVLEFTYS-----------SGETRSIDL 640

  Fly   732 TRYMV------PLDLQEANESQRLWQRVSEAIANEDQVAATEEKTVLEERQRADAKERLSSDSVH 790
            |:..|      |::.|...||:|||:.|:||::.:|...|||.|..|||||||:.:.|..:::..
 Frog   641 TKLPVTRKLVRPVEKQGLFESRRLWENVTEALSAKDIERATEHKRALEERQRAEERLRAETETPW 705

  Fly   791 MPDLFELDSYGQWLYKYADLRP-WDS 815
            :...|..:..| |.||    :| |.|
 Frog   706 ITKYFTKEGDG-WSYK----QPLWKS 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42668NP_001189250.2 PH_OPR5_ORP8 231..361 CDD:270103 23/153 (15%)
PH 238..356 CDD:278594 23/148 (16%)
Oxysterol_BP 471..796 CDD:279564 134/375 (36%)
Prefoldin <849..943 CDD:238453
osbpl11NP_001025662.1 PH_ORP10_ORP11 48..154 CDD:270106 7/34 (21%)
Oxysterol_BP 363..725 CDD:366530 139/392 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D949920at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.