DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42668 and SPBC354.07c

DIOPT Version :9

Sequence 1:NP_001189250.2 Gene:CG42668 / 42412 FlyBaseID:FBgn0261550 Length:990 Species:Drosophila melanogaster
Sequence 2:NP_595231.3 Gene:SPBC354.07c / 2540947 PomBaseID:SPBC354.07c Length:397 Species:Schizosaccharomyces pombe


Alignment Length:420 Identity:108/420 - (25%)
Similarity:169/420 - (40%) Gaps:71/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 EQGEQVEELAEE-----NKSLIWCIVKQVRPGM-DLSKVVLPTFILEPRSFLDKLSDSYYHADLL 513
            |..||:||..:.     :||.....:|.:.... |||.:..|:|||...|.|:.:|..:...:|.
pombe     3 ETSEQMEETVQSGNEPISKSTWMGFIKNLATFTGDLSTLSAPSFILSGTSLLEYMSYWFEFPELF 67

  Fly   514 SKAVQEDDAFTRMKLVVQWYLSSFYK------KPKGL-KKPYNPILGERFRCYWQHPSGSRTFYI 571
            ...|.......||..|::||::...:      |..|. |||.||||||.|...|....| :....
pombe    68 VTIVDFPTPKERMLAVLKWYITGLSREYASRNKNYGTEKKPLNPILGELFYGSWDSSKG-KVELT 131

  Fly   572 AEQVSHHPPVSAFYVTNREDGFSITCSILAKSKFYGNSTSAVLEGAATMTLLPRGECYTATTPYA 636
            |||||||.|.||.:|..:|.|.::......:|.|.|.:......|...:.|....|.|..|.|..
pombe   132 AEQVSHHGPESAAHVVCKEAGITVDTHNKYRSGFSGRTVYVNQLGQLRVHLEKYNETYYITLPNI 196

  Fly   637 HCKGILMGTLSMELGGKINIECENTGYRTELEFKLKPFLGGADATNVVVGKIKLGKETLATINGH 701
            ..:|:......:||.|...| ..||.|.|::::..:.:..|...:         .|.|:...|. 
pombe   197 SLEGLWFMAPYIELYGSTYI-VSNTNYITKIDYSGRGYFRGTKNS---------FKATIFEKNE- 250

  Fly   702 WDKECRVKDSKTGEETVLFKVDAETRSKRLTRYMVPLDLQEAN-------------ESQRLWQRV 753
             |.:..|:...|||..:...      |.:.|.:.:.:...||.             ||:.:|:.|
pombe   251 -DPDYIVEGVWTGESKLTIP------SLKSTIFFLSIPSLEATPITVKPESEMGDWESRNVWKEV 308

  Fly   754 SEAIANEDQVAATEEKTVLEERQRADAKERLSSDSVHMPDLFELDSYGQWLYKYADLRPW----- 813
            |.|:|:.:....:.:|:.:|:.||...|:..:..:|             |..:|.   .|     
pombe   309 SAALASGNYDIVSSKKSTIEQSQRDMRKKEEAEGAV-------------WARRYF---KWEEHDS 357

  Fly   814 DSRNDVRQ-----YECQFKVLTQTRHKSVP 838
            |:||.:.|     .|..|.:.....|.|:|
pombe   358 DARNALAQAVLEVIEPGFWIYIGDTHPSLP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42668NP_001189250.2 PH_OPR5_ORP8 231..361 CDD:270103
PH 238..356 CDD:278594
Oxysterol_BP 471..796 CDD:279564 89/345 (26%)
Prefoldin <849..943 CDD:238453
SPBC354.07cNP_595231.3 Oxysterol_BP 37..358 CDD:279564 91/355 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.