DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nlg4 and LOC688542

DIOPT Version :9

Sequence 1:NP_001369025.1 Gene:Nlg4 / 42402 FlyBaseID:FBgn0083975 Length:1437 Species:Drosophila melanogaster
Sequence 2:XP_038954018.1 Gene:LOC688542 / 688542 RGDID:1587637 Length:559 Species:Rattus norvegicus


Alignment Length:705 Identity:187/705 - (26%)
Similarity:288/705 - (40%) Gaps:212/705 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLISWMHCAGASTADIYKGARLGHRIVQTRYGRLHGLILPLDSFRFLRSVEVFLGVPYATPPTKQ 82
            :|:..:|..|..:|...:....|    |.|...:|.....:|       |..|||:|:|.||...
  Rat    17 LLLLVLHVRGQDSASPIRNTHTG----QVRGSLVHVKDTDID-------VHTFLGIPFAKPPVGP 70

  Fly    83 NRFSPTRAPAPWDGIRISDKYSPVCPQRLPNIQNETAALEKMPKGRLEYLKRLLPFLENQSEDCL 147
            .||:|..||.||.|:|.:..:..:|      :||:    ..|....::.:|.:||.: :.|||||
  Rat    71 LRFAPPEAPEPWSGVRDATSHPAMC------LQND----NMMGSEDMKIMKLILPPI-SMSEDCL 124

  Fly   148 YLNVFSPVNA--GANEKKLPVIVFIHGESFEWSSGNPYDGSVLASYGEVVVVTLNYRLGILGFLN 210
            |||:::|.:|  |:|   |||:|:|||.:......:.||||:||:..:|||||:.||||:|||.:
  Rat   125 YLNIYAPTHAHEGSN---LPVMVWIHGGALTVGMASMYDGSMLAATEDVVVVTIQYRLGVLGFFS 186

  Fly   211 ANPNPHAHARVANYGLMDQMAALHWIQQNIQKFGGDPNSVTLAGHGTGAACINYLMTSPTMVRGL 275
            ....   ||| .|:|.:||:|||.|:||||..|||:||.||:.|...|...::..:.|| |.:||
  Rat   187 TGDE---HAR-GNWGYLDQVAALRWVQQNIAHFGGNPNRVTIFGESAGGTSVSSHVVSP-MSQGL 246

  Fly   276 FHRAILMSGSAYSSWALVEDPVLFAIKLAKEVNCTIPDDINRHHEQI------------------ 322
            ||.||:.||..                       .:||.|:|..|.:                  
  Rat   247 FHGAIMESGVV-----------------------VLPDLISRSSEMVYRIVANLSGCAAVDSETL 288

  Fly   323 VDCLRDVPLEDLYLADIQAPNFLTSFGPS-VDGVVIRPGHSNLDIDDLMARNSRRSSADSGFQSS 386
            :.|||.  ..:..:.||   |.:....|: |||..: |.|..   :.|.:.|..|..:       
  Rat   289 MQCLRG--KSEAEILDI---NKVFKIIPAVVDGEFL-PKHPQ---ELLASANFHRVPS------- 337

  Fly   387 AGGGGGQGGGAGGGGGGGSGSSFGGGYFGGSGAGTMNMGGHYDVLFGVVTGESIWRF-----SAH 446
                                                        :.|:...|..|..     ||.
  Rat   338 --------------------------------------------IIGINNDEYGWILPMIFDSAQ 358

  Fly   447 DIQNGFEGERRDKIIRTYVRN-AYNYHL-NEIFYTIVNEY---TDWDRTSQHPINTRDTAVAALS 506
            .|:     |...|.:.|.::: |....| .|....::.||   |:..:|.|....      ..:.
  Rat   359 KIE-----EITRKTLPTVLKSTALKMMLPPECGDLLMEEYMGDTEDPKTLQAQFR------EMMG 412

  Fly   507 DAQFVAPIVRAGDILAANSPPPVSSSSTAGSPGANAAASTSAGSTQPSGRCYFYVFDYQT---KD 568
            |..||.|.::......:::|                              .|||.|.:::   ||
  Rat   413 DFMFVIPALQVAHFQRSHAP------------------------------VYFYEFQHRSSFFKD 447

  Fly   569 GDYPQRMGTVHGEDLPYIFGAPLVDGFSHFPQNYTKSETALSEAVMIFWTNFARTGNPNEHHRQD 633
            .. |..:...||:::..:||  .:.|...||  :|:.|..||..:|.:|.||||.||||     .
  Rat   448 VK-PPHVKADHGDEVFLVFG--YLVGDIKFP--HTEEEELLSRKIMKYWANFARHGNPN-----S 502

  Fly   634 SSLPVSKERNRFRSITWENYDPLH-QKYLEIGMKPRIKNHFRAHQLSIWLRLIPE 687
            ..||           .|...|  | .:||::.::|.:....:|.:|..|.:.:|:
  Rat   503 EGLP-----------HWPVMD--HDDQYLQLDIQPSVGRALKARRLKFWTKTLPQ 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nlg4NP_001369025.1 COesterase 43..681 CDD:395084 180/672 (27%)
LOC688542XP_038954018.1 COesterase 30..538 CDD:395084 182/684 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.