DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5023 and Cnn1

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_113935.2 Gene:Cnn1 / 65204 RGDID:621883 Length:297 Species:Rattus norvegicus


Alignment Length:163 Identity:70/163 - (42%)
Similarity:92/163 - (56%) Gaps:3/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQEQEVLNWVFAVIGEKVPSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTNFQLMENIQRFQ 71
            ::|||:..|:..|.|.::.| .:.|.|||||.||:..|||.||||||:.|...|:..:|||..|.
  Rat    29 QREQELREWIEGVTGRRIGS-NFMDGLKDGIILCEFINKLQPGSVKKVNESTQNWHQLENIGNFI 92

  Fly    72 AAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPTLGPKMADKNERSFTEE 136
            .|:.||||...:||:..||||..|..||..:|.||..:.:......  .:|.|.|:|.||.|..|
  Rat    93 KAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKV--NVGVKYAEKQERRFEPE 155

  Fly   137 QLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            :||.....:.||||.||.|||.|....|..||:
  Rat   156 KLREGRNIIGLQMGTNKFASQQGMTAYGTRRHL 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 47/100 (47%)
Calponin 145..169 CDD:459803 12/23 (52%)
Cnn1NP_113935.2 CH_CNN1 27..134 CDD:409131 47/105 (45%)
Calponin-like 1 164..189 13/25 (52%)
Calponin 164..188 CDD:459803 12/23 (52%)
Calponin-like 2 204..229
Calponin 204..228 CDD:459803
Calponin-like 3 243..268
Calponin 243..267 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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