DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5023 and tagln3a

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001096584.1 Gene:tagln3a / 563096 ZFINID:ZDB-GENE-060531-53 Length:213 Species:Danio rerio


Alignment Length:174 Identity:61/174 - (35%)
Similarity:92/174 - (52%) Gaps:11/174 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQEQEVLNWVFAVIGEKV----PSGQ-YEDILKDGIWLCKLANKLAPGS---VKKIQERGTNFQL 63
            |.|..:::|:....|:.:    |..| ::..|..|..||:|.|.|.|..   :|||.|....|:.
Zfish    25 ELESRLVDWILIQCGDDLQRPEPGKQNFQKWLMSGTILCRLINSLYPSGEEPIKKITESKMVFKQ 89

  Fly    64 MENIQRFQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALG--RITQKHPEYTG-PTLGPKM 125
            ||.|.:|....::|||...:||||.||:|.:::..|..:|.|||  .:|:....|.| |....:.
Zfish    90 MEKISQFLQFAEEYGVNRGDIFQTVDLWEGKDMAAVQRTLMALGSEALTKDDGHYRGDPDWFHRK 154

  Fly   126 ADKNERSFTEEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            ...::|.|:|||||.....:.:|||.|:||||:|..|.|..|.:
Zfish   155 TKGHKREFSEEQLRQGRVVIGMQMGSNRGASQSGMVGYGTPRQI 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 38/110 (35%)
Calponin 145..169 CDD:459803 12/23 (52%)
tagln3aNP_001096584.1 CH_SF 23..141 CDD:469584 39/115 (34%)
Calponin 174..198 CDD:459803 12/23 (52%)

Return to query results.
Submit another query.