DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5023 and cnn1

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001015796.1 Gene:cnn1 / 548513 XenbaseID:XB-GENE-957080 Length:297 Species:Xenopus tropicalis


Alignment Length:165 Identity:65/165 - (39%)
Similarity:93/165 - (56%) Gaps:7/165 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQEQEVLNWVFAVIGEKVPSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTNFQLMENIQRFQ 71
            ::|.|:..|:..:.|..:..| :.|.|||||.||:|.|||.||:|:||.|...|:..:|||..|.
 Frog    28 QKEAELREWIEGLTGRTIGKG-FMDSLKDGIILCELINKLQPGTVRKINEATQNWHKLENIGNFI 91

  Fly    72 AAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPT--LGPKMADKNERSFT 134
            ..:.:|||...:||:..||||..|:.||..:|.||..:.:.    .|.|  :|.|.||:.||.:.
 Frog    92 KGITQYGVKPHDIFEANDLFENTNLTQVQYTLLALASVAKT----KGATVDIGVKYADRQERKYD 152

  Fly   135 EEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            .::|:.....:.||||.||.|||.|....|..||:
 Frog   153 LDKLKEGRNIIGLQMGTNKYASQKGMTSYGTRRHL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 43/100 (43%)
Calponin 145..169 CDD:459803 12/23 (52%)
cnn1NP_001015796.1 CH_SF 26..133 CDD:469584 43/109 (39%)
Calponin 163..187 CDD:459803 12/23 (52%)
Calponin 203..227 CDD:459803
Calponin 242..266 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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