DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5023 and Cnn3

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_062232.1 Gene:Cnn3 / 54321 RGDID:71044 Length:330 Species:Rattus norvegicus


Alignment Length:165 Identity:67/165 - (40%)
Similarity:99/165 - (60%) Gaps:1/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NKEQEQEVLNWVFAVIGEKVPSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTNFQLMENIQR 69
            :::.|:::.||:..|.|..:.: .::..|||||.||:|.|||.||||||:.|...|:..:|||..
  Rat    25 DQQAEEDLRNWIEEVTGMGIGT-NFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGN 88

  Fly    70 FQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPTLGPKMADKNERSFT 134
            |..|::.||:...:||:..||||..|:.||..:|.||..:.:....:|...:|.|.|:|..|.|.
  Rat    89 FIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFD 153

  Fly   135 EEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            |.:|:|.:..:.||||.||.|||||....|..||:
  Rat   154 EGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHL 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 43/102 (42%)
Calponin 145..169 CDD:459803 13/23 (57%)
Cnn3NP_062232.1 CH_CNN3 23..133 CDD:409133 43/108 (40%)
Calponin-like 1 164..189 14/25 (56%)
Calponin 164..188 CDD:459803 13/23 (57%)
Calponin-like 2 204..229
Calponin 204..228 CDD:459803
Calponin-like 3 243..268
Calponin 243..267 CDD:459803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..330
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.