DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5023 and cnn2

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_998841.1 Gene:cnn2 / 407907 XenbaseID:XB-GENE-1005289 Length:295 Species:Xenopus tropicalis


Alignment Length:173 Identity:60/173 - (34%)
Similarity:93/173 - (53%) Gaps:8/173 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RNK-------EQEQEVLNWVFAVIGEKVPSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTNF 61
            |||       ::|.|:..|:..|.|..: ...::..||||:.||:|.|||.|.|:.|:.....|:
 Frog    18 RNKLAQKYDPQKETELKVWIEEVTGMSI-GPDFQKGLKDGVILCELMNKLRPHSIPKVNVSRQNW 81

  Fly    62 QLMENIQRFQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPTLGPKMA 126
            ..:||:..|..|:..||:...::|:..||||..|:.||.:||.||..:.:.....:...:|.|.:
 Frog    82 HQLENLSNFIKAMNLYGMKSVDLFEANDLFENGNMTQVQVSLLALAGLAKSRGMQSEVDIGVKYS 146

  Fly   127 DKNERSFTEEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            :|.||:|.:...:|....:.||||.||.|||:|....|..||:
 Frog   147 EKQERNFDDNTKKAGHCVIGLQMGTNKCASQSGMTAYGTRRHL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 40/110 (36%)
Calponin 145..169 CDD:459803 12/23 (52%)
cnn2NP_998841.1 CH_CNN2 26..134 CDD:409132 37/108 (34%)
Calponin 165..189 CDD:459803 12/23 (52%)
Calponin 205..229 CDD:459803
Calponin 244..267 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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