DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5023 and cnn3

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_989257.1 Gene:cnn3 / 394869 XenbaseID:XB-GENE-951266 Length:331 Species:Xenopus tropicalis


Alignment Length:165 Identity:68/165 - (41%)
Similarity:95/165 - (57%) Gaps:9/165 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EQEVLNWVFAV----IGEKVPSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTNFQLMENIQR 69
            |:|:..|:..|    |||....|     |:|||.||.|.|||.|||:|||.|...|:..:|||..
 Frog    29 EEELRLWIEEVTGMIIGENFQQG-----LRDGIILCNLINKLQPGSIKKINEAKLNWHKLENIGN 88

  Fly    70 FQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPTLGPKMADKNERSFT 134
            |..|::.||:...:||:..||||..|:.||..||.:|..:.:....:|...:|.|.|:|.:|.|.
 Frog    89 FIKAMQDYGMKPHDIFEANDLFENGNMTQVQTSLVSLAGLAKTRGFHTSVDIGVKYAEKQKRQFG 153

  Fly   135 EEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            :|:::|.:..:.||||.||.|||||....|..||:
 Frog   154 DEKMKAGQSVIGLQMGTNKCASQAGMTAYGTRRHL 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 45/102 (44%)
Calponin 145..169 CDD:459803 13/23 (57%)
cnn3NP_989257.1 CH_CNN3 23..133 CDD:409133 45/108 (42%)
Calponin 164..188 CDD:459803 13/23 (57%)
Calponin 204..228 CDD:459803
Calponin 243..267 CDD:459803
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.