DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5023 and cpn-2

DIOPT Version :10

Sequence 1:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_493713.2 Gene:cpn-2 / 173424 WormBaseID:WBGene00000778 Length:203 Species:Caenorhabditis elegans


Alignment Length:176 Identity:64/176 - (36%)
Similarity:86/176 - (48%) Gaps:16/176 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQEQEVLNWVFAVIGEKV--------PSGQYEDILKDGIWLCKLANKLAPGSVKKIQERGTN--F 61
            |:..|||.|:..|.||:.        .|....::||||:.||||..||.| |.:.:..:...  |
 Worm    25 EEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLIEKLDP-SCRVVYNKKPKMAF 88

  Fly    62 QLMENIQRFQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQ---KHPEYTGPTLGP 123
            .:||||..|.||.|::||.|...|||.||:|.:...:|...|..|..:.|   .|.|:  |....
 Worm    89 PMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEH--PAWVV 151

  Fly   124 KMADKNERSFTEEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169
            |:|..:.|.|.|..:|..|..:.||.|.||.|||.|....|..|.:
 Worm   152 KLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMSPYGLPRQI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 42/110 (38%)
Calponin 145..169 CDD:459803 11/23 (48%)
cpn-2NP_493713.2 CH_SF 25..130 CDD:469584 40/105 (38%)
Calponin 173..197 CDD:459803 11/23 (48%)

Return to query results.
Submit another query.