DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10887 and VIP4

DIOPT Version :9

Sequence 1:NP_650866.1 Gene:CG10887 / 42399 FlyBaseID:FBgn0038773 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_851237.1 Gene:VIP4 / 836236 AraportID:AT5G61150 Length:625 Species:Arabidopsis thaliana


Alignment Length:757 Identity:156/757 - (20%)
Similarity:249/757 - (32%) Gaps:281/757 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DNQVIKDGESSESWPAFNRRSPNPSFSSVDQQGNKTKARRQHQSRSHSFHSTANSVPESQGPLES 72
            ||   .:.|..||....|||.||  ::|.:.:|...                    ||.:|..|.
plant    17 DN---SEEEEIESEHECNRRQPN--YASDEAEGGVE--------------------PEGEGEAEV 56

  Fly    73 RSDLNAKTSSKSERPYISTSNSSWTSESSSGSPPDSGESSSFSTSSSLSSSLLCAPEPKSINWSN 137
            .....|:..|..|:..:..               |.|||......||..:      :|:..:.:.
plant    57 EVHGEAEAESDGEQGDVEL---------------DPGESEGEREQSSQEA------DPQEESEAR 100

  Fly   138 PKSSSNIS------------NETTTSAGQVGGIPSFSESDDQGSVD--------SETVSNIRKST 182
            ...|.|..            .|...|..:..|...:...|::  ||        ||....::.:.
plant   101 DSDSDNKEEEHGGRVAKKRRQEVVESGSERSGEKHYESEDEE--VDQTRSPRSPSEEKEEVQVAQ 163

  Fly   183 SLIELKDNFNTIIDEDNNQQLSNEGNILSPGTVSISNFPSSNEVANGLIDEMEQDLLSKQHSTST 247
            |.:.:::.|.:..|||..:.:.|                           ::|||    :|  .:
plant   164 SDVNIRNVFGSSDDEDAEEYVRN---------------------------DVEQD----EH--RS 195

  Fly   248 PINKSNTMEKELLPLQCSSFPPTSSEGNILKPRVNPVPLGPSSNTEYESNGKNYNIEKRLSQLRY 312
            ||......||:|.|           :..:|...:      |..:.:|||..::.       :.||
plant   196 PIEDEEGSEKDLRP-----------DDMVLDDII------PEEDPQYESEAEHV-------EARY 236

  Fly   313 SSDEKESDVLSYASSDSLDLNFDY----GDNAKNQNGNGMNGEVNGDKESQVLDIEEQRKPFEKD 373
                :|..|     ...|::...:    ||..|          :|..|.|.::.|:.  |||   
plant   237 ----RERPV-----GPPLEVEVPFRPPPGDPVK----------MNMIKVSNIMGIDP--KPF--- 277

  Fly   374 VAVKFQTTITTQNCGLLKGPSQFLKMPYFIPVESKAYVPE-TFQDRMTKNDLKDEQSREDFINRL 437
                                            ::|.:|.| ||        :.||...::.|...
plant   278 --------------------------------DAKTFVEEDTF--------MTDEPGAKNRIRLD 302

  Fly   438 KATVRWR---ENENKT-KESNAKIVRWSDGSETFHVGNEVFDMMHHPVTVNQNHLYVR-LGSFYQ 497
            ...||.|   ..:.|| .||||:.|||||||....:||||.::.......:||||::: .....|
plant   303 NNIVRHRFVKSRDGKTYSESNARFVRWSDGSLQLLIGNEVLNITEQDAKEDQNHLFIKHEKGILQ 367

  Fly   498 PQGLIQNKLTVRP-MLDSNFGQSHVQALRNRATNKPQSGCVKV---ITNMGSNPEHDHDRRMKEE 558
            .||.|..|:...| .|.||   ||  .|........|....||   :|::  :||.:.::|.|.|
plant   368 SQGRILKKMRFTPSSLTSN---SH--RLLTAIVESRQKKAFKVKNCVTDI--DPEREKEKREKAE 425

  Fly   559 LSKLR-----QEGREKNRALMKNHPPKRDRHYQGS----------DHNVAKNAGAFEED------ 602
            ...|:     .:.|||   :.:.:|...:|....:          |.:...|.| :|||      
plant   426 SQNLKASTKLSQAREK---IKRKYPLPVERRQLSTGYLEDALDEDDEDYRSNRG-YEEDLEAEAQ 486

  Fly   603 ------------------------------------DGEGADCETSSALEVTNEPMRSE-EDTED 630
                                                :.|.::.||... |....|.|.. :|:||
plant   487 RERRILNAKKSHKGIPGRSSMTSARPSRRQMEYSESEREESEYETEEE-EEEKSPARGRGKDSED 550

  Fly   631 HMDDDASWSSPNSQEEGKQS-----SSEDDLPIGGAIRKPTR 667
            ..::||   ..:.:|.||.:     ..|::...||...|..|
plant   551 EYEEDA---EEDEEERGKSNRYSDEDEEEEEVAGGRAEKDHR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10887NP_650866.1 Leo1 396..548 CDD:281933 48/161 (30%)
VIP4NP_851237.1 2A1904 <61..250 CDD:273344 46/277 (17%)
Leo1 262..422 CDD:367768 57/211 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2593
eggNOG 1 0.900 - - E1_KOG2428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004097
OrthoInspector 1 1.000 - - otm3196
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23146
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.000

Return to query results.
Submit another query.