DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10887 and Atu

DIOPT Version :9

Sequence 1:NP_650866.1 Gene:CG10887 / 42399 FlyBaseID:FBgn0038773 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_524240.1 Gene:Atu / 40684 FlyBaseID:FBgn0019637 Length:725 Species:Drosophila melanogaster


Alignment Length:754 Identity:181/754 - (24%)
Similarity:291/754 - (38%) Gaps:196/754 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSESWPAFNRRSPNPSFSSVDQQGNKTKARRQHQSRSHSFHSTANSVPES-----QGPLESR--- 73
            |:.|..|.:|.      |.:.......::|..|..||.|..|..:..|||     .|.|:||   
  Fly    64 SARSGSAESRH------SQLSGSARSKRSRSAHSRRSGSARSRKSGTPESPQSHRSGSLQSRKSG 122

  Fly    74 -----------SDLNAKTSSKSERPYISTSNSSWTSESSSGSPPDSGESSSFSTSSSLSSS---- 123
                       |..:..|.|:......|..:.|..|..|..:..|..||.|.|.|.||..:    
  Fly   123 SPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRKSGSAQSDRSESRSRSHSGSLKGNEESR 187

  Fly   124 ------LLCAPEPKSINWSNPKSSSNISNETTTSAGQVG---------GIPSFSESD-------- 165
                  .:......|.:.|..:|.|...:.|:.|..:.|         |..|.|.||        
  Fly   188 SNSPNLQIDVERANSKSGSRSRSRSRSGSRTSRSRSKTGTPSPNRSRSGSASGSGSDVGVPKKKA 252

  Fly   166 ------DQGSVDSETVSNIRKSTSLIELKDNFNTIIDEDNNQQLSNEGNILSPGTVSISNFPSSN 224
                  ||....|.:.|:|.:|.:..:.....:|  |.|:||.:..:.             |::.
  Fly   253 RKASGSDQEKKKSGSDSDIEESPTKAKKSRLIDT--DSDSNQDVGKKA-------------PAAA 302

  Fly   225 EVANGLIDEMEQDLLSKQHSTSTPINKSNTMEKELLPLQCSSFPPTSSEGNILKPRVNPVPLGPS 289
            ::. |..|::..|                  |.|..|                ..|.:||.....
  Fly   303 DIF-GDADDISDD------------------EDEAGP----------------AARKSPVRSKSR 332

  Fly   290 SNTEYESNGKNYNIEKRLSQLRYSSDEKESDVLSYASSDSLDLNFDYGDNAKNQNGNGMNGEVNG 354
            |.::..|:.::.:..:..|:.| |.|:.||.|.|....|                      |...
  Fly   333 SQSKSHSHSRSMSHSRSRSRSR-SRDKVESQVESAPKED----------------------EPEP 374

  Fly   355 DKESQVLDIEEQRKPFEKDVAVKFQTTITTQNCGLLKGPSQ-FLKMPYFIPVESKAYVPETFQDR 418
            ..|::: |:|..|  ...|:                 |..| |:|:|.|:.|.:..:.|||::|.
  Fly   375 LPETRI-DVEIPR--ISADL-----------------GKEQHFIKLPNFLSVVTHPFDPETYEDE 419

  Fly   419 MTKNDLKDEQSREDFINRLKATVRWRENENK----TKESNAKIVRWSDGSETFHVGNEVFDMMHH 479
            :.:.:..||:.|:....::..|:||||..|.    .:||||:.|||||||.:.|:|||:||....
  Fly   420 IDEEETMDEEGRQRIKLKVSNTIRWREYMNNKGDMVRESNARFVRWSDGSMSLHLGNEIFDAYRQ 484

  Fly   480 PVTVNQNHLYVRLGSFYQPQGLIQNKLTVRPMLDSNFGQSHVQALRNRATNKPQSGCVKVITNMG 544
            |:..:.|||:||.|:..|.|.:.:.|||.||....:|  :|.:...:.|....::..:|::|.:|
  Fly   485 PLLGDHNHLFVRQGTGLQGQSVFRTKLTFRPHSTESF--THKKMTMSLADRSSKTSGIKILTQVG 547

  Fly   545 SNPEHDHDRRMKEELSKLRQEGREKNRALMKNHPP-----------KRDRHYQGSDHNVA----- 593
            .:|..|...:::||.:||||..|.::::|.|...|           ...:|.:|||...|     
  Fly   548 KDPTTDRPTQLREEEAKLRQAMRNQHKSLPKKKKPGAGEPLIGGGTSSYQHDEGSDDENAISLSA 612

  Fly   594 ------KNAGA----------FEEDDGEGADCETSSALEV----TNEPMRSEEDTEDHMDDDASW 638
                  |.:||          :..|:.||:|.|...:.:|    .::.:|..:...|.....:..
  Fly   613 IKNRYKKGSGAGQAEVKASTIYSSDEDEGSDFEARRSKKVDKAKASKALRDSDSESDAGSAKSGH 677

  Fly   639 SSPNSQEEGKQSSSEDD--LPIGGAIRKPTRLVYSGSDS 675
            |:.:..|.|..|.||::  ...||...|......|||.|
  Fly   678 SNKSGGEGGSASGSENEGSQKSGGGSSKSASGSGSGSGS 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10887NP_650866.1 Leo1 396..548 CDD:281933 55/155 (35%)
AtuNP_524240.1 Leo1 396..550 CDD:281933 55/155 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447476
Domainoid 1 1.000 92 1.000 Domainoid score I2593
eggNOG 1 0.900 - - E1_KOG2428
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004097
OrthoInspector 1 1.000 - - otm3196
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23146
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.840

Return to query results.
Submit another query.