DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10887 and Leo1

DIOPT Version :10

Sequence 1:NP_650866.1 Gene:CG10887 / 42399 FlyBaseID:FBgn0038773 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001005548.1 Gene:Leo1 / 300837 RGDID:1549772 Length:678 Species:Rattus norvegicus


Alignment Length:715 Identity:174/715 - (24%)
Similarity:288/715 - (40%) Gaps:141/715 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FHSTANSVPESQGPLESRSDLNAKTSSKSERPYISTSNSSWTSESSSGSPPDSGESSS---FSTS 117
            |.|.|.|..|       |.|.::.:.|.|::...::.:::..|||......|||:.|:   |...
  Rat     8 FGSEAESEAE-------RKDSDSGSDSDSDQDNGASGSNASGSESDQDERGDSGQPSNKELFGDD 65

  Fly   118 SSLSSSLLCAPEPKSINWSNPKSSSNISNETTTSAGQVGGIPSFSESDDQGSVDSETVSNIRKST 182
            |....    ||.         .|.|:..:|.:.:..:.....|..|.::...||..:.|..... 
  Rat    66 SEEEG----APH---------HSGSDNHSEQSDNRSEASEERSDHEDNEPSDVDQHSGSEAHND- 116

  Fly   183 SLIELKDNFNTIIDEDNNQQLSNEGNILS---------------PGTVSISNFPSSNEVANGLID 232
                 .|:.:...|:|:....|:||:..|               .|...........::.|...:
  Rat   117 -----DDDDDDDEDDDDEGHRSDEGSHHSEAEGSEKAQSDDEKWDGEDKSDQSDDDEKLQNSDDE 176

  Fly   233 EMEQ--DLLSKQHSTSTPINKSNTMEKELLPLQCSSFPPTSSE--GNILKPRVNPVPLGPSSNTE 293
            |.||  |....|:|........||.:::...|........|.|  ||....|.     ..|.|.|
  Rat   177 EREQGSDDEKLQNSADEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERP-----AASDNDE 236

  Fly   294 YESNG------------KNYNIEKRLSQL-----RYSSDEKESDVLSYAS--SDSLD-------L 332
            .:.|.            |..|.:....|:     |:|.||:|.|..|.::  |||.|       .
  Rat   237 EKQNSDDEDRPQVSDEEKMQNSDDERPQVSDEDRRHSDDEEEQDQKSESARGSDSEDEVLRMKRK 301

  Fly   333 NFDYGDN--------AKNQNG------------NGMNGEVNGDKESQVLD---IEEQRKPFEKDV 374
            |....|:        .|:.||            :|.:||.......|.:|   :.:.::..|...
  Rat   302 NAIPSDSEVDSDTEVPKDNNGTMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQQEEEPIP 366

  Fly   375 AVKFQTTITTQNCGLLKGPSQFLKMPYFIPVESKAYVPETFQDRMTKNDLKDEQSREDFINRLKA 439
            ..:.:..|...|.. |.....|:|:|.|:.||.:.:.|:.::|.....::.||:.|.....:::.
  Rat   367 ETRIEVEIPKVNTD-LGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVEN 430

  Fly   440 TVRWR----ENENKTKESNAKIVRWSDGSETFHVGNEVFDMMHHPVTVNQNHLYVRLGSFYQPQG 500
            |:|||    |..|:.|||||:||:|||||.:.|:||||||:...|:..:.|||::|.|:..|.|.
  Rat   431 TIRWRMRRDEEGNEIKESNARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQA 495

  Fly   501 LIQNKLTVRP-MLDSNFGQSHVQALRNRATNKPQSGCVKVITNMGSNPEHDHDRRMKEELSKLRQ 564
            :.:.|||.|| ..||...:....:|.:|. :|.|.  ::::...|.:||......:|:|..:||.
  Rat   496 VFKTKLTFRPHSTDSATHRKMTLSLADRC-SKTQK--IRILPMAGRDPECQRTEMIKKEEERLRA 557

  Fly   565 E-GREKNRALMKNHPPKRDRHYQGSDHNVAKNAGAFEEDDGEGADCETSSALEVTNE---PMRSE 625
            . .||..:..|     :..:|.:|...:..:.....||::||    |:.|...:.|.   .:|.|
  Rat   558 SIRRESQQRRM-----REKQHQRGLSASYLEPDRYDEEEEGE----ESVSLAAIKNRYKGGIREE 613

  Fly   626 ------EDTEDHMDDDASW-----SSPNSQEEGKQS---SSEDDLPIGGAIRKPTRLVYSGSDSD 676
                  .|:::..::|.:.     ...||.|||:.|   .:|||   ..|.:|..:.|.|..:.:
  Rat   614 RARIYSSDSDEGSEEDKAQRLLKAKKLNSDEEGESSGKRKAEDD---DKANKKHKKYVISDEEEE 675

  Fly   677  676
              Rat   676  675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10887NP_650866.1 Leo1 396..559 CDD:461126 59/167 (35%)
Leo1NP_001005548.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..373 80/395 (20%)
MSCRAMM_ClfA <11..373 CDD:468110 78/392 (20%)
Leo1 386..548 CDD:461126 58/164 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..596 9/45 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 613..678 16/66 (24%)

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