Protein Alignment Rh3 and opn1mw3

DIOPT Version :10

• Sequence 1: NP_524411.1
• Gene: Rh3 / 42398
• FlyBaseID: FBgn0003249
• Length: 383
• Species: Drosophila melanogaster
• Sequence 2: NP_878312.1
• Gene: opn1mw3 / 360152
• ZFINID: ZDB-GENE-030728-6
• Length: 349
• Species: Danio rerio
• Alignment Length: 346
• Identity: 87/346 - (25%)
• Similarity: 151/346 - (43%)
• Gaps: 44/346 - (12%)

  Fly    44 PEHWLTYPEPPESMNYLLGTLYIFFTLMSMLG---NGLVIWVFSAAKSLRTPSNILVINLAFC-D 104
            |:::|..|     ..:.|..:|:||  :...|   |||.:.|.:..|.||.|.|.:::|||.. .
Zfish    27 PQYYLAEP-----WQFKLLAVYMFF--LMCFGFPINGLTLVVTAQHKKLRQPLNFILVNLAVAGT 84

  Fly   105 FMMMVKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG-KMT 168
            .|:.....:..|.:.:..:.||..||.|.|.:.:..|..:..:...:|.:|:.|:.:||.. |.:
Zfish    85 IMVCFGFTVTFYTAINGYFVLGPTGCAIEGFMATLGGQISLWSLVVLAIERYIVVCKPMGSFKFS 149

  Fly   169 HGKAIAMIIFIYMYATPWVVACYTET---WGRFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFF 228
            ...|.|.|.|.::.|    ::|....   |.|::|||...||..||.|.|  ::...:|..:|..
Zfish   150 SNHAFAGIGFTWIMA----LSCAAPPLVGWSRYIPEGMQCSCGPDYYTLNPDYNNESYVLYMFCC 210

  Fly   229 SFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLRSNVDKNKETAEIRIAKAAITICFLF 293
            .|:.|.|.|.:.|.::|..|    ||...|.::          .::.:.||..:.:..|.:...|
Zfish   211 HFIFPVTTIFFTYGRLVCTV----KAAAAQQQE----------SESTQKAEREVTRMVILMVLGF 261

  Fly   294 FCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL 358
            ..:||||..::....|......:.....:||...|..:..:|.:|.:.:.::|     .|....|
Zfish   262 LVAWTPYASVAAWIFFNRGAAFSAQFMAVPAFFSKSSSIFNPIIYVLLNKQFR-----NCMLTTL 321

  Fly   359 ----NEKAPESSAVASTSTTQ 375
                |....:.|:..|||.|:
Zfish   322 FCGKNPLGDDESSTVSTSKTE 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh3	NP_524411.1	7tmA_photoreceptors_insect	59..349	CDD:320207	76/299 (25%)
		TM helix 1	60..86	CDD:320207	9/28 (32%)
		TM helix 2	93..118	CDD:320207	6/25 (24%)
		TM helix 3	130..160	CDD:320207	7/29 (24%)
		TM helix 4	170..190	CDD:320207	5/19 (26%)
		TM helix 5	218..247	CDD:320207	8/28 (29%)
		TM helix 6	277..307	CDD:320207	8/29 (28%)
		TM helix 7	317..342	CDD:320207	5/24 (21%)
opn1mw3	NP_878312.1	Rhodopsin_N	3..37	CDD:313611	3/14 (21%)
		7tm_GPCRs	39..317	CDD:475119	76/302 (25%)
		TM helix 1	40..64	CDD:410628	8/25 (32%)
		TM helix 2	73..95	CDD:410628	5/21 (24%)
		TM helix 3	111..133	CDD:410628	3/21 (14%)
		TM helix 4	155..171	CDD:410628	5/19 (26%)
		TM helix 5	201..224	CDD:410628	6/22 (27%)
		TM helix 6	251..273	CDD:410628	6/21 (29%)
		TM helix 7	285..310	CDD:410628	5/24 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	329..349		5/14 (36%)