Protein Alignment Rh3 and opn1mw2

DIOPT Version :10

• Sequence 1: NP_524411.1
• Gene: Rh3 / 42398
• FlyBaseID: FBgn0003249
• Length: 383
• Species: Drosophila melanogaster
• Sequence 2: NP_878311.1
• Gene: opn1mw2 / 360151
• ZFINID: ZDB-GENE-030728-5
• Length: 349
• Species: Danio rerio
• Alignment Length: 349
• Identity: 101/349 - (28%)
• Similarity: 147/349 - (42%)
• Gaps: 55/349 - (15%)

  Fly    53 PPESMNYLLG--------TLYIFFTLMSMLG-NGLVIWVFSAAKSLRTPSNILVINLAFC-DFMM 107
            |.|...|.|.        ..|:||.:...|. |.|.:.|.:..|.||.|.|.:::||||. ..|.
Zfish    23 PYEYTQYYLADPWQFKALAFYMFFLICFGLPINVLTLLVTAQHKKLRQPLNYILVNLAFAGTIMA 87

  Fly   108 MVKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG-KMTHGK 171
            .....:..|.|.:...|||..||.|.|...:..|..|..:...:|.:|:.|:.:||.. |.:...
Zfish    88 FFGFTVTFYCSINGYMALGPTGCAIEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSSNH 152

  Fly   172 AIAMIIFIYMYATPWVVA--CYTET---WGRFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFS 229
            |:|.|.|      .||:|  |....   |.|::|||..|||..||.|.|  |:...:|..:|...
Zfish   153 AMAGIAF------TWVMASSCAVPPLFGWSRYIPEGMQTSCGPDYYTLNPEFNNESYVLYMFSCH 211

  Fly   230 FVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLRSNVDKNKETAEIRIAKAAITICFLFF 294
            |..|.|.|.:.|..:|..|    ||...|.::          .::.:.||..:.:..|.:...|.
Zfish   212 FCVPVTTIFFTYGSLVCTV----KAAAAQQQE----------SESTQKAEREVTRMVILMVLGFL 262

  Fly   295 CSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLALN 359
            .:|.||...:....|......:..|..|||...|..|..:|.:|.:.:.::|     .|   .||
Zfish   263 VAWVPYASFAAWIFFNRGAAFSAQAMAIPAFFSKASALFNPIIYVLLNKQFR-----SC---MLN 319

  Fly   360 E----KAP----ESSAVASTSTTQ 375
            .    |:|    |||:| |||.|:
Zfish   320 TLFCGKSPLGDDESSSV-STSKTE 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh3	NP_524411.1	7tmA_photoreceptors_insect	59..349	CDD:320207	86/307 (28%)
		TM helix 1	60..86	CDD:320207	8/34 (24%)
		TM helix 2	93..118	CDD:320207	7/25 (28%)
		TM helix 3	130..160	CDD:320207	8/29 (28%)
		TM helix 4	170..190	CDD:320207	7/21 (33%)
		TM helix 5	218..247	CDD:320207	8/28 (29%)
		TM helix 6	277..307	CDD:320207	7/29 (24%)
		TM helix 7	317..342	CDD:320207	8/24 (33%)
opn1mw2	NP_878311.1	Rhodopsin_N	3..37	CDD:313611	4/13 (31%)
		7tm_GPCRs	39..317	CDD:475119	85/305 (28%)
		TM helix 1	40..64	CDD:410628	7/23 (30%)
		TM helix 2	73..95	CDD:410628	6/21 (29%)
		TM helix 3	111..133	CDD:410628	4/21 (19%)
		TM helix 4	155..171	CDD:410628	7/21 (33%)
		TM helix 5	201..224	CDD:410628	6/22 (27%)
		TM helix 6	251..273	CDD:410628	5/21 (24%)
		TM helix 7	285..310	CDD:410628	8/24 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	328..349		8/16 (50%)