DRSC/TRiP Functional Genomics Resources

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Protein Alignment mdlc and AT1G01350

DIOPT Version :10

Sequence 1:NP_650865.1 Gene:mdlc / 42397 FlyBaseID:FBgn0038772 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_171642.2 Gene:AT1G01350 / 838964 AraportID:AT1G01350 Length:343 Species:Arabidopsis thaliana


Alignment Length:353 Identity:134/353 - (37%)
Similarity:194/353 - (54%) Gaps:63/353 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FKKRNLKKGAGIRRKKETSSDESAKSSDEETKGKASALVRAENRRKRTNPN----FQSTKTMSKA 73
            |||....|..   ||:...:||    .|.::|.::|.|   :|.:|...|:    |.|       
plant    33 FKKPTKSKNI---RKRTIDADE----EDGDSKSESSIL---QNLKKVAKPDSKLYFSS------- 80

  Fly    74 KRQAGGVGDDGSSSASDDDKLGIAYKSKREALPSGPQDQGATSINEMDTELDRDAQAIHARAL-K 137
                 |.....::::...::....|.|.:|.  ....|.|||:..|.:|:.::||:||..|.| |
plant    81 -----GPSKSSTTTSGAPERSVFHYDSSKEI--QVQNDSGATATLETETDFNQDARAIRERVLKK 138

  Fly   138 INEELEGK----ADDKIYRGINNYAQY---YKKQDTAAGNASSGMVRSGPIRAPAHLRATVRWDY 195
            .:|.|:|.    :|:|:|:||:.|..:   ::::.|.:...:.|  ..||:||.||:|.:.|:||
plant   139 ADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGG--SHGPLRASAHIRVSARFDY 201

  Fly   196 QPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLEMDHE--------NQRTGDVDSDGDDTKYE 252
            |||||||||||||||:||||||||||.|||.|||:|.:.|        |:..| |:.:.|:...:
plant   202 QPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMG-VEDEDDEADKD 265

  Fly   253 IHSDEETLPFKCHICRQSFVNPVVTKCKHYFCEKCALAQYKKSQRCIICSQQTNGIFNPAKELIA 317
            ...||..|||.|.|||:.||:||||||||||||.|||..:.|:::|.:|:|.|.||||.|.|:..
plant   266 SDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKK 330

  Fly   318 RLKTNPMENSDSDEEEEFGKKEDKAEAG 345
            |:                .::..|||.|
plant   331 RM----------------AEERSKAEQG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mdlcNP_650865.1 COG5152 <181..320 CDD:227481 83/146 (57%)
AT1G01350NP_171642.2 COG5152 <193..337 CDD:227481 79/160 (49%)

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