DRSC/TRiP Functional Genomics Resources

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Protein Alignment mdlc and AT5G06420

DIOPT Version :10

Sequence 1:NP_650865.1 Gene:mdlc / 42397 FlyBaseID:FBgn0038772 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_196260.1 Gene:AT5G06420 / 830530 AraportID:AT5G06420 Length:378 Species:Arabidopsis thaliana


Alignment Length:367 Identity:136/367 - (37%)
Similarity:196/367 - (53%) Gaps:73/367 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SEEAASTSSFGFKKRNLKKGAGIRRKKETSSDESAKSSDEETKGKASALVRAENRRKRTNPNFQ- 65
            ::|:....:| |||....|..   ||:...:||    .|.::|.::|.|   :|.:|...|:.. 
plant    61 NQESQQVCTF-FKKPTKSKNI---RKRTIDADE----EDGDSKSESSIL---QNLKKVAKPDSNL 114

  Fly    66 ------STKTMSKAKRQAGGVGDDGSSSASDDDKLGIAYKSKREALPSGPQDQGATSINEMDTEL 124
                  ||:|....:|..                  ..|.|.:|.  ....|.|||:..|.:|:.
plant   115 YFSSGPSTRTSGAPERPV------------------FHYDSSKEI--QVQNDSGATATLETETDF 159

  Fly   125 DRDAQAIHARAL-KINEELEGK----ADDKIYRGINNYAQY---YKKQDTAAGNASSGMVRSGPI 181
            ::||:||..|.| |.:..|:|.    :|:|:|:||:.|..:   ::::.|.:...:.|  ..||:
plant   160 NQDARAIRERVLKKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGG--SHGPL 222

  Fly   182 RAPAHLRATVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLEMDHE--------NQR 238
            ||.||:|.:.|:|||||||||||||||||:||||||||||.|||.|||:|.:.|        |:.
plant   223 RASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKA 287

  Fly   239 TGDVDSDGDDTKYEIHSDEETLPFKCHICRQSFVNPVVTKCKHYFCEKCALAQYKKSQRCIICSQ 303
            .| |:.|.|:...:...||..|||.|.|||:.|::||||||||||||.|||..:.|:::|.:|:|
plant   288 MG-VEDDDDEADKDSDEDENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQ 351

  Fly   304 QTNGIFNPAKELIARLKTNPMENSDSDEEEEFGKKEDKAEAG 345
            .|.||||.|.|:..|:                .::..|||.|
plant   352 PTMGIFNAAHEIKKRM----------------AEERSKAEQG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mdlcNP_650865.1 COG5152 <181..320 CDD:227481 83/146 (57%)
AT5G06420NP_196260.1 COG5152 <228..372 CDD:227481 79/160 (49%)

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