DRSC/TRiP Functional Genomics Resources

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Protein Alignment Regnase-1 and n4bp1

DIOPT Version :9

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_956081.2 Gene:n4bp1 / 327327 ZFINID:ZDB-GENE-030131-5538 Length:858 Species:Danio rerio


Alignment Length:358 Identity:126/358 - (35%)
Similarity:180/358 - (50%) Gaps:62/358 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CEV-----QEQHKQQQQQQQVHQQQQK---------HGSSNKL-PVRKQESCSDDDESQSPS-RT 55
            |||     :|...:.:::.::.....|         .|||..: |||.:...:....||.|. ||
Zfish   475 CEVIIIDDEEDFTETERKPRLTPLDLKPESRFDYLPRGSSQTMVPVRMETVTNLRSSSQGPPLRT 539

  Fly    56 TERQNLEFAKKLGYSEQSIHSALTRLGSEAKQNELLAELIKLTADAPRPAHIGGGGSPSSMTSTL 120
            ::       .:.|.|.|::........|||:.....|.|..:                |....:|
Zfish   540 SD-------TRPGCSYQTLPGRAPLPRSEAQYTSKAAPLTGM----------------SRFQQSL 581

  Fly   121 SSP-----TGGSNSSGLRHIVIDGSNVALSHGNNLVFSCRGIRICVDWFRQRGHRDITAFVPNWR 180
            .:|     .....|..||||:|||||||::||.:.|||||||.|.|:.|.:||||:||.|||.||
Zfish   582 RTPYRLILQNEPGSPNLRHIIIDGSNVAMAHGLHRVFSCRGIAIAVEAFWRRGHREITVFVPQWR 646

  Fly   181 KEMANNNIADQELLYELEHERYLVFTPSRHLDGKRVSCYDDRFILKLAVETDGIVVSNDNYRDLI 245
            :: .:.||.:|..|.:||:.|.|.|||||.:.|.|:|.:||||:|.||.:|.|::|:|||.||.:
Zfish   647 QK-KDPNITEQHFLNQLENLRLLSFTPSREVCGHRISSHDDRFLLHLAEKTGGVIVTNDNLRDFV 710

  Fly   246 LESNEFRRVVQERLLMYSFVNDIFMPPDDPLGRSGPNLDLFLCSQTQQKMADAQQLCP------Y 304
            .:|..:||::.||||.::||.|.||.||||||:.||:||.||...::     ...:.|      .
Zfish   711 SQSEAWRRIIHERLLQFTFVEDHFMIPDDPLGKHGPHLDEFLLKDSR-----GSPIIPPLRTDLR 770

  Fly   305 GKKCTYGQKCKFRHHNQAPLLQRLPLQASHSAP 337
            .....|.|..:...|..:|  ...|    ||.|
Zfish   771 ATPSVYSQAAQSTAHPSSP--SHWP----HSGP 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 RNase_Zc3h12a 131..284 CDD:288804 85/152 (56%)
n4bp1NP_956081.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..321
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..424
RNase_Zc3h12a 597..750 CDD:288804 86/153 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 774..823 8/30 (27%)
CoCUN. /evidence=ECO:0000250|UniProtKB:O75113 813..858
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593107
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3777
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D335949at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12876
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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