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Protein Alignment Regnase-1 and Ccdc59
DIOPT Version :9
Sequence 1: | NP_650863.3 |
Gene: | Regnase-1 / 42394 |
FlyBaseID: | FBgn0038769 |
Length: | 540 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001101560.1 |
Gene: | Ccdc59 / 314799 |
RGDID: | 1311912 |
Length: | 240 |
Species: | Rattus norvegicus |
Alignment Length: | 113 |
Identity: | 23/113 - (20%) |
Similarity: | 39/113 - (34%) |
Gaps: | 23/113 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 402 KKLQRQQPPPAYRLLVPTYSAPLQQQQHQAQQQHQQSNSSTNYHHQYLTRTPSAPVTDQGLGLPL 466
::|::||......|.......||.:::...:|...:..||. :..| |..|.|...:..|.
Rat 102 ERLRKQQRKVDLALSEGQLDQPLPEEEGNTEQAVSEEQSSV-FQPQ-----PEEPSTVNSVTFPK 160
Fly 467 PAHNFAHLSASDSRINEELHASQ-------------QLPREEQRRLLR 501
.... ..|:.:..||....| :..|||.:||.:
Rat 161 KKRK----KTSNQKAQEEYERVQAKRAAKKFEFEMRKQEREEAQRLYK 204
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Regnase-1 | NP_650863.3 |
RNase_Zc3h12a |
131..284 |
CDD:288804 |
|
Ccdc59 | NP_001101560.1 |
60KD_IMP |
<164..>211 |
CDD:294333 |
9/45 (20%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3777 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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