DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Regnase-1 and CCDC59

DIOPT Version :10

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_054886.2 Gene:CCDC59 / 29080 HGNCID:25005 Length:241 Species:Homo sapiens


Alignment Length:209 Identity:39/209 - (18%)
Similarity:64/209 - (30%) Gaps:95/209 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 GQQLVSPGGNNNNVKINSLISREP---LGRTKSNTIEQVCQGFSAQMDLSEGAVESSQPNRHKKL 404
            |:.:.:.|..|.||:..:.....|   :|..:..      |||:.:                :||
Human    19 GEGVSTVGYRNKNVRQKTWRPNHPQAFVGSVREG------QGFAFR----------------RKL 61

  Fly   405 QRQQPPPAYRLLVPTYSAPLQQQQHQAQQQHQQSNSSTNYHHQYLTRTPSAPVTDQGLGLPLPAH 469
            :.||   :|:.|:                 .::..:.|:...|:..|.|.               
Human    62 KIQQ---SYKKLL-----------------RKEKKAQTSLESQFTDRYPD--------------- 91

  Fly   470 NFAHLSASDSRINEELHASQQLPREEQRRLLRYHLGSLFPPHQVHAVL----------------- 517
            |..||..::    ||.|       .:|.|.:.:.|.     .|||..|                 
Human    92 NLKHLYLAE----EERH-------RKQARKVDHPLS-----EQVHQPLLEEQCSIDEPLFEDQCS 140

  Fly   518 --QLYPEETDAKTI 529
              |..|||...||:
Human   141 FDQPQPEEQCIKTV 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 UBA_6 61..97 CDD:407876
PIN_Zc3h12-like 135..263 CDD:350296
Regnase_1_C 495..534 CDD:465803 13/54 (24%)
CCDC59NP_054886.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 1/2 (50%)
rRNA_processing <160..238 CDD:400708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..205
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.