DRSC/TRiP Functional Genomics Resources

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Protein Alignment Regnase-1 and Y59E9AR.2

DIOPT Version :9

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_500753.1 Gene:Y59E9AR.2 / 190418 WormBaseID:WBGene00021998 Length:383 Species:Caenorhabditis elegans


Alignment Length:440 Identity:88/440 - (20%)
Similarity:150/440 - (34%) Gaps:143/440 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LRHIVIDGSNVA--LSH--GNNL--------VFSCRGIRICVDWFRQRGHRDITAFVPNWRKEMA 184
            ||.|.|||::|:  |:|  ..|:        :|:.|.|.:.:.:|..|||..: .|:|...::.|
 Worm    50 LRPICIDGTDVSNKLNHIIRKNMDLFPVDKSIFNMRAITMALWYFISRGHAAV-VFLPTNLRDFA 113

  Fly   185 N--NNIADQELLYELEHERYLVFTPSRHLD-------GKRVSCYDDRFILKLAVETDGIVV-SND 239
            .  ::..:..||.:||   .:||..|..|:       .|.|:.:        |...||.:| |..
 Worm   114 QKCSDPHELSLLAKLE---LIVFDESTALNPSSAVLLSKTVATW--------AQNNDGCIVGSRK 167

  Fly   240 NYRDLILESNEFRRVVQERLLMYSFVNDIFMPPDDPLGRSGPNLDLFLCSQTQQKMADAQQLCPY 304
            .|..|....:|....|...|:..:|.      ||:.|                       ::|. 
 Worm   168 KYGLLGQRYSELIDRVTNTLISPAFT------PDNEL-----------------------EICD- 202

  Fly   305 GKKCTYGQKCKFRHHNQAPLLQRLPLQASHSAPLHTNG---GQQLVSPGGNNNNVKINSLISREP 366
                                |.||.|.|........|.   |.||::    ::.|.|.|.:::  
 Worm   203 --------------------LVRLVLAADEVRRNDENSNCMGYQLLA----SDQVVIMSKLAK-- 241

  Fly   367 LGRTKSNTIEQVCQGFSAQMDLSEGAVE---SSQPNRHKKLQRQQPPPAYRLLVPTYSAPLQQQQ 428
                        ..|..:.:||...|.|   |:.||             ||.:.        ..|
 Worm   242 ------------MIGKDSMIDLCNRARELNTSTNPN-------------YRNIF--------NNQ 273

  Fly   429 HQAQQQHQQSNSSTNYHHQYLTR--TPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHASQQL 491
            .|:....:...|..:::..:|..  .|..|:..:.:..|.   ...| ..|..|:.|:  .|.:|
 Worm   274 KQSTSMGRVYQSPYHFNDPFLPDYVAPPPPIALESVAKPT---RIGH-RHSIYRVGED--KSTEL 332

  Fly   492 PREEQRRLLRYH------LGSLFPPHQVHAVLQLYPEETDAKTICAAILN 535
            ...:.||...|.      |..:|...:..|::...|::.:...:....:|
 Worm   333 ENGDNRRKAVYRGALIDALQPMFGLEKATALVNGNPDQNEINDLIELGIN 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 RNase_Zc3h12a 131..284 CDD:288804 44/173 (25%)
Y59E9AR.2NP_500753.1 RNase_Zc3h12a 49..202 CDD:371828 44/192 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3777
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12876
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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