DRSC/TRiP Functional Genomics Resources

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Protein Alignment Regnase-1 and Y51H4A.13

DIOPT Version :10

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_502970.2 Gene:Y51H4A.13 / 190150 WormBaseID:WBGene00013107 Length:547 Species:Caenorhabditis elegans


Alignment Length:457 Identity:107/457 - (23%)
Similarity:166/457 - (36%) Gaps:113/457 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RPAHIGGGGSPSSMTSTLSSPTGGSNSSGLRHIVIDGSNVALSHGN---NLVFSCRGIRICVDWF 164
            ||.|..|...|     ||           ||.:.::...|..|:.:   :...:.||:.|.:..|
 Worm    24 RPRHHHGNSVP-----TL-----------LRPVFMNAVEVGYSYAHCDRDKKLNVRGVTIALWHF 72

  Fly   165 RQRGHRDITAFVPNWRKEMANNNIADQEL--LYELEHERYLVFTPSRHLDGKRVSCYDDRFILKL 227
            ..|||:.| |.:|...|..|..:....||  ||.|   ..:.||...   |.......:|.::..
 Worm    73 ICRGHQAI-ALLPYCFKNYAEKSSRYSELMMLYRL---NLIEFTLGY---GSEKYTEVNRIMVNR 130

  Fly   228 AVETDGIVVSNDNYRDLILESNEFRRVVQERLLMYSF-VNDIFMPPDDPLGRSGPNLDLFLCSQT 291
            |.||.|.:|:....:.:....:....||::||||.:| .:||..|.|.||||:||:|:..|  |.
 Worm   131 AYETGGCLVARSQMQGITDNKSHLIDVVEQRLLMPTFNGDDIMFPIDGPLGRNGPSLEQTL--QC 193

  Fly   292 QQKMADAQQLCPYGKKCTYGQKCKFRHHNQAPLLQRLPLQA------SHSAPLHTNGG--QQLVS 348
            .|.::|       .:.|:..|   ....:|...|::|.|..      :....:...||  :|:..
 Worm   194 DQGLSD-------WRSCSEHQ---LLLSDQRHWLEKLALLVPEKVVWTRMVQMIQGGGIDEQIEG 248

  Fly   349 PGGNNNNVKINSLISREPLGRTKSNTI-EQVC---QGFSAQMDLSEGAV---------------- 393
            .|||:.       ...||......|.. .|.|   ...:...|...|..                
 Worm   249 AGGNDG-------FFDEPPSPPLENPFHRQTCTVPSNTNIHNDHCSGQAPPDPYQPHGHPAHHIP 306

  Fly   394 -----------ESSQPNR-HKKLQRQQPPPAYRLLVPTYSAPLQ------------QQQHQAQQQ 434
                       ..|.|.| |...|.::.|.:.||::...|:|.:            ||||| .|:
 Worm   307 NPHQLHHQHRRRYSSPRRFHGNHQPRRNPSSTRLVIRYGSSPPEVVGRGGVDGGGHQQQHQ-HQR 370

  Fly   435 HQQSNSSTNYHHQYLTRTPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHAS--QQLPREEQR 497
            ....:|:|....:....|.|...|:..          .....:|..|..||.|.  ::..||.::
 Worm   371 RTSKHSATTDSVESTASTQSGERTESS----------TQSIEADEDIARELDAQLIEESRRETEK 425

  Fly   498 RL 499
            |:
 Worm   426 RV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 UBA_6 61..97 CDD:407876
PIN_Zc3h12-like 135..263 CDD:350296 34/132 (26%)
Regnase_1_C 495..534 CDD:465803 1/5 (20%)
Y51H4A.13NP_502970.2 RNase_Zc3h12a 37..189 CDD:403256 48/158 (30%)
UDM1_RNF168 383..443 CDD:409018 11/55 (20%)
Blue background indicates that the domain is not in the aligned region.

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