DRSC/TRiP Functional Genomics Resources

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Protein Alignment Regnase-1 and Y51H4A.13

DIOPT Version :9

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_502970.2 Gene:Y51H4A.13 / 190150 WormBaseID:WBGene00013107 Length:547 Species:Caenorhabditis elegans


Alignment Length:457 Identity:107/457 - (23%)
Similarity:166/457 - (36%) Gaps:113/457 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RPAHIGGGGSPSSMTSTLSSPTGGSNSSGLRHIVIDGSNVALSHGN---NLVFSCRGIRICVDWF 164
            ||.|..|...|     ||           ||.:.::...|..|:.:   :...:.||:.|.:..|
 Worm    24 RPRHHHGNSVP-----TL-----------LRPVFMNAVEVGYSYAHCDRDKKLNVRGVTIALWHF 72

  Fly   165 RQRGHRDITAFVPNWRKEMANNNIADQEL--LYELEHERYLVFTPSRHLDGKRVSCYDDRFILKL 227
            ..|||:.| |.:|...|..|..:....||  ||.|   ..:.||...   |.......:|.::..
 Worm    73 ICRGHQAI-ALLPYCFKNYAEKSSRYSELMMLYRL---NLIEFTLGY---GSEKYTEVNRIMVNR 130

  Fly   228 AVETDGIVVSNDNYRDLILESNEFRRVVQERLLMYSF-VNDIFMPPDDPLGRSGPNLDLFLCSQT 291
            |.||.|.:|:....:.:....:....||::||||.:| .:||..|.|.||||:||:|:..|  |.
 Worm   131 AYETGGCLVARSQMQGITDNKSHLIDVVEQRLLMPTFNGDDIMFPIDGPLGRNGPSLEQTL--QC 193

  Fly   292 QQKMADAQQLCPYGKKCTYGQKCKFRHHNQAPLLQRLPLQA------SHSAPLHTNGG--QQLVS 348
            .|.::|       .:.|:..|   ....:|...|::|.|..      :....:...||  :|:..
 Worm   194 DQGLSD-------WRSCSEHQ---LLLSDQRHWLEKLALLVPEKVVWTRMVQMIQGGGIDEQIEG 248

  Fly   349 PGGNNNNVKINSLISREPLGRTKSNTI-EQVC---QGFSAQMDLSEGAV---------------- 393
            .|||:.       ...||......|.. .|.|   ...:...|...|..                
 Worm   249 AGGNDG-------FFDEPPSPPLENPFHRQTCTVPSNTNIHNDHCSGQAPPDPYQPHGHPAHHIP 306

  Fly   394 -----------ESSQPNR-HKKLQRQQPPPAYRLLVPTYSAPLQ------------QQQHQAQQQ 434
                       ..|.|.| |...|.::.|.:.||::...|:|.:            ||||| .|:
 Worm   307 NPHQLHHQHRRRYSSPRRFHGNHQPRRNPSSTRLVIRYGSSPPEVVGRGGVDGGGHQQQHQ-HQR 370

  Fly   435 HQQSNSSTNYHHQYLTRTPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHAS--QQLPREEQR 497
            ....:|:|....:....|.|...|:..          .....:|..|..||.|.  ::..||.::
 Worm   371 RTSKHSATTDSVESTASTQSGERTESS----------TQSIEADEDIARELDAQLIEESRRETEK 425

  Fly   498 RL 499
            |:
 Worm   426 RV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 RNase_Zc3h12a 131..284 CDD:288804 47/158 (30%)
Y51H4A.13NP_502970.2 RNase_Zc3h12a 37..189 CDD:371828 48/158 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3777
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12876
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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