DRSC/TRiP Functional Genomics Resources

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Protein Alignment Regnase-1 and khnyn

DIOPT Version :10

Sequence 1:NP_650863.3 Gene:Regnase-1 / 42394 FlyBaseID:FBgn0038769 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002934330.2 Gene:khnyn / 100497056 XenbaseID:XB-GENE-1219052 Length:841 Species:Xenopus tropicalis


Alignment Length:256 Identity:105/256 - (41%)
Similarity:152/256 - (59%) Gaps:27/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NSSG---LRHIVIDGSNVALSHGNNLVFSCRGIRICVDWFRQRGHRDITAFVPNWRKEMANNNIA 189
            |..|   ||:|:|||||||:.||.:..||||||.:.|.:|..||||.||.|||.||.: .::.:.
 Frog   579 NEKGNEELRYIIIDGSNVAMIHGLHRFFSCRGIALAVQYFWDRGHRGITVFVPQWRMK-KDSKVK 642

  Fly   190 DQELLYELEHERYLVFTPSRHLDGKRVSCYDDRFILKLAVETDGIVVSNDNYRDLILESNEFRRV 254
            :|..|.||.....|.|||||.::||||:.|||||:|:||.:|||::|:|||.||:..||..::.:
 Frog   643 EQHFLTELNDLGLLSFTPSRTIEGKRVTSYDDRFMLQLAEKTDGVIVTNDNLRDIAAESQAWKTI 707

  Fly   255 VQERLLMYSFVNDIFMPPDDPLGRSGPNLDLFLCS----QTQQK---MADAQQLCPYGKKCTYGQ 312
            :::|||.|:||.||||.|||||||:||.|:.||..    :|:.|   .|..:......||.:..:
 Frog   708 IKDRLLQYTFVGDIFMVPDDPLGRNGPPLNQFLSKNLRPRTKSKGHSFAGRRGTHSAPKKSSQTE 772

  Fly   313 KCKFRHHNQAPLLQRLPLQASHSAPLHT-NGGQQL------VSPGGNNNNVKINSLISREP 366
            ...||......:|:      ...|.:.: |..|:|      :.|   :.:.|::.::.|||
 Frog   773 VLNFRDRKAGAVLE------ERKADVRSFNETQRLRHELLNIFP---SQDSKVDYILHREP 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Regnase-1NP_650863.3 UBA_6 61..97 CDD:407876
PIN_Zc3h12-like 135..263 CDD:350296 65/127 (51%)
Regnase_1_C 495..534 CDD:465803
khnynXP_002934330.2 KH-I_N4BP1_like_rpt1 18..88 CDD:411808
KH-I_NYNRIN_like 90..155 CDD:411905
RNase_Zc3h12a 585..738 CDD:403256 84/153 (55%)
Blue background indicates that the domain is not in the aligned region.

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