DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment idc and ZNF254

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_975011.3 Gene:ZNF254 / 9534 HGNCID:13047 Length:659 Species:Homo sapiens


Alignment Length:200 Identity:77/200 - (38%)
Similarity:111/200 - (55%) Gaps:22/200 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 SIKSEKDISIGEVLAR---------KHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTE 377
            ::.:.|.|.:||.|.:         :.|.:.|   |||:...:|.:|  |:.||..:...|.||:
Human   392 TLTTHKIIHVGEKLYKCEECGKGFNRSSNLTT---HKIIHTGEKPYK--CEECGKAFIWSSTLTK 451

  Fly   378 HIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNER 442
            |.::|:..||::||.||..|..:..|.||...|||.:||||..|..:|:..||...|..|||.|:
Human   452 HKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEK 516

  Fly   443 PYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH--------ERRGQ 499
            ||:|:.|.|.|.:::||..||:|||.|||:.|:.|||.|.|:..|.||:.||        |..|:
Human   517 PYKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGK 581

  Fly   500 SARES 504
            |...|
Human   582 SFNRS 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
COG5048 386..>447 CDD:227381 28/60 (47%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 32/66 (48%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 9/19 (47%)
ZNF254NP_975011.3 KRAB 13..73 CDD:214630
C2H2 Zn finger 184..204 CDD:275368
C2H2 Zn finger 212..260 CDD:275368
COG5048 264..625 CDD:227381 76/199 (38%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368 1/7 (14%)
C2H2 Zn finger 408..428 CDD:275368 5/22 (23%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
C2H2 Zn finger 548..568 CDD:275368 9/19 (47%)
C2H2 Zn finger 576..596 CDD:275368 3/10 (30%)
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.