DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and Zkscan8

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_631880.2 Gene:Zkscan8 / 93681 MGIID:1913815 Length:588 Species:Mus musculus


Alignment Length:565 Identity:140/565 - (24%)
Similarity:218/565 - (38%) Gaps:145/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QPKEPMASIFNDDS--EKDLTHM-IRECGGVPIKQFDHYPDKICEKCFKVLKMAFKFRETCQ--- 87
            :|::|.::....|.  |:||..: |.|..|...:...|..:...::.|::     :||:.|.   
Mouse     4 EPRKPSSAPSPPDQAPEEDLVIVKIEEDHGWDEESGVHENNTPGQELFRL-----RFRQLCYQET 63

  Fly    88 ----------RSYGH------------------LRQF--VGPVEVEQRPPE---KKGSETATKLE 119
                      |::.|                  |.||  :.|.|::....|   :.|.|..|.||
Mouse    64 LGPREALIQLRAFCHQWLRPDLNSKEQILELLVLEQFLTILPGELQALVKEHQLQNGEEVVTLLE 128

  Fly   120 PDVDPDEAEQEPEHDEEDEDVDLD-ESHYAEADDAAETQGGVFHDEIEDGIL--VELEKDRIVHV 181
                                 ||: :.:......:..|.|   |..:.|.::  ....:...:||
Mouse   129 ---------------------DLERQINVLGRPVSTHTHG---HRVLWDEVIPSKSASEPPSIHV 169

  Fly   182 KN-EQVEEDGIIEEVYD-------VYETYEGDLIPDQGYDHEMADQALSE--LSAEIEYLDQVEH 236
            :: ..|.:..:.::..|       .|........|.........||.::.  |:|..:.|:::| 
Mouse   170 QSLATVPKSPVPQKPQDRGKRPDFTYNAMSSSQKPTPSQKGSSGDQEVTARLLTAGFQTLERIE- 233

  Fly   237 DQLTESAHE----DDAEVDLN-------------------STEEEFVPSKSVRASIHARNATKRR 278
            |.......|    |.::.|||                   |..:|..|.:.:...|         
Mouse   234 DMAVSLIREEWLLDPSQKDLNRDNRPEKYRNMFSLDGETRSENKELFPKQGISPGI--------- 289

  Fly   279 VNPRRSATS--TASVAVESSTSKTTD--------RGNPLKVRRGNSDSAGSKMSIKSEKDISIGE 333
             .|...||:  ...|.|..:..:|.|        :|||.:.||...|..|...:..|      |.
Mouse   290 -QPHGEATAKCNGDVIVGLAHGETQDLLGKLERHQGNPTQERRHKCDECGKSFAQNS------GL 347

  Fly   334 VLA-RKHSGIK----TKGG-----HKILLGDK----KEFKYICDVCGNMYPSQSRLTEHIKVHSG 384
            |.. |.|:|.|    |..|     ...||..:    |..:|.|..||..:...:.|..|.::|:|
Mouse   348 VRHWRIHTGEKPYQCTVCGKAFSYRSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRIHTG 412

  Fly   385 VKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVC 449
            .||::|..||..|:|:..|..|...|:|.|||:|:.|..||:..|....|.||||.|:|||||.|
Mouse   413 EKPYQCNQCGKAFSQSAGLILHQRIHSGERPYECNECGKAFSHSSHLIGHQRIHTGEKPYECDEC 477

  Fly   450 HKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH 494
            .|||..::.|..|:..||||||:.|:.||:.|.|...|..|:.||
Mouse   478 GKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGLIEHQRIH 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 17/99 (17%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 28/60 (47%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 10/22 (45%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-H2C2_2 432..455 CDD:290200 15/22 (68%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
zf-H2C2_2 459..481 CDD:290200 11/21 (52%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
Zkscan8NP_631880.2 SCAN 48..158 CDD:128708 23/138 (17%)
KRAB_A-box 233..268 CDD:143639 7/35 (20%)
COG5048 <322..574 CDD:227381 78/207 (38%)
C2H2 Zn finger 334..354 CDD:275368 6/25 (24%)
C2H2 Zn finger 363..382 CDD:275368 4/18 (22%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
C2H2 Zn finger 502..522 CDD:275368 7/19 (37%)
C2H2 Zn finger 530..550 CDD:275368
C2H2 Zn finger 558..578 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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