DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and AT5G61470

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_200955.1 Gene:AT5G61470 / 836268 AraportID:AT5G61470 Length:304 Species:Arabidopsis thaliana


Alignment Length:437 Identity:85/437 - (19%)
Similarity:126/437 - (28%) Gaps:190/437 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QKWIVCRVCLQQPKEPMA----------SIF--NDDSEKDLTHMIRECGGVPIKQFDHYPDKICE 70
            :|..:|:||.:......|          ..|  :..|...:|..:|.|.                
plant     6 KKTKICQVCKKSFSNGKALGGHMRAHTLKFFPGSSSSTGSITPSLRSCN---------------- 54

  Fly    71 KCFKVLKMAFKFR---ETCQRSYGHLRQFVG------PVEVEQRPPEKKGSETATKLEPDVDPDE 126
                  .:...||   ||....:.|..:.||      ..|.|||...||      |:..|:    
plant    55 ------NLGASFRRPNETVLARFVHTSEVVGGPKPDLNKEAEQRTTVKK------KIVVDL---- 103

  Fly   127 AEQEPEHDEEDEDVDLDESHYA----EADDAAETQGGVFHDEIEDGILVELEK-DRIVHVKNEQV 186
              :|....|.:.|:.::||...    :.|:.:|             .|..|:. |.:|..:..:.
plant   104 --EEENSIESESDITIEESALCLLQMKDDNMSE-------------YLQNLKSIDSLVSTRKRKD 153

  Fly   187 EEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVD 251
            .|:.|  |:             |...:||.:|.         ||:.:.|.:.     :|||....
plant   154 TENYI--EI-------------DSDENHEDSDD---------EYVVEDEDED-----NEDDDVKS 189

  Fly   252 LNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDS 316
            |.|..|..:                                                   |:|| 
plant   190 LTSDVENLI---------------------------------------------------GDSD- 202

  Fly   317 AGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKV 381
                     |.|...|:..|  :.|.|.|.|       ||:.||.||.||.:..|...|..|...
plant   203 ---------EDDDDYGDENA--YYGGKRKRG-------KKQSKYTCDTCGKVLRSYQALGGHRTS 249

  Fly   382 HSGV------------------KPHECEICGHCFAQAQQLARHMNTH 410
            |...                  :.:||:||...||..|.|..|...|
plant   250 HKYKRLKISDKNYFGEDGPIVRRQYECQICNRMFASGQALGGHKKIH 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 14/87 (16%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
zf-H2C2_2 375..399 CDD:290200 8/41 (20%)
COG5048 386..>447 CDD:227381 10/25 (40%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 403..426 CDD:290200 3/8 (38%)
C2H2 Zn finger 418..438 CDD:275368
zf-H2C2_2 432..455 CDD:290200
C2H2 Zn finger 446..466 CDD:275368
zf-H2C2_2 459..481 CDD:290200
C2H2 Zn finger 474..494 CDD:275368
AT5G61470NP_200955.1 zf-C2H2_6 10..31 CDD:290623 4/20 (20%)
zf-C2H2_6 228..251 CDD:290623 8/22 (36%)
C2H2 Zn finger 230..250 CDD:275368 7/19 (37%)
zf-C2H2_6 274..297 CDD:290623 10/23 (43%)
C2H2 Zn finger 276..296 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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