DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment idc and ZKSCAN3

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_077819.2 Gene:ZKSCAN3 / 80317 HGNCID:13853 Length:538 Species:Homo sapiens


Alignment Length:411 Identity:114/411 - (27%)
Similarity:177/411 - (43%) Gaps:87/411 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 VHVKNEQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEYLDQ---------- 233
            :|.| ||:.|..::|:...:   ..|:|   |.:..|...::..|:...:|||::          
Human    79 MHSK-EQILELLVLEQFLTI---LPGNL---QSWVREQHPESGEEVVVLLEYLERQLDEPAPQVS 136

  Fly   234 -VEHDQ---------LTESAHEDDAEVDL-------NSTEEEFVPSKSVRASIHARNATKRR--- 278
             |:..|         ||.:.....::..|       .|...:.:..:.::..:.|.....|.   
Human   137 GVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPVLAHGGCCREDKV 201

  Fly   279 VNPRRSATSTASVAVESS--------TSKTTDRGNPLKVRRGNSDSAGSKMSIKSEK-----DIS 330
            |..|.:..|...:.||..        |.:.:.:||  ..|....::.||.:|:..||     |:.
Human   202 VASRLTPESQGLLKVEDVALTLTPEWTQQDSSQGN--LCRDEKQENHGSLVSLGDEKQTKSRDLP 264

  Fly   331 IGEVLARKHSG------------IKT---KGGHKILLGDKKE-----FKYICDVCGNMYPSQSRL 375
            ..|.|..|..|            |.|   .|..:..|..|::     .::||..||..:...|.|
Human   265 PAEELPEKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSGL 329

  Fly   376 TEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTN 440
            ::|.::|:|.||:|||.||..|..:..|..|...|||.:||:|..|..||:..|...||.|.||.
Human   330 SKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTG 394

  Fly   441 ERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH----------- 494
            |:|||||.|.|||:.:.:|..|..|||||||:.|.:|||.|.::..|..|:.||           
Human   395 EKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPEQ 459

  Fly   495 ----ERRGQSARESVAGLVSY 511
                :.|.:|..|:|...:||
Human   460 GEAWKSRMESQLENVETPMSY 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
COG5048 386..>447 CDD:227381 29/60 (48%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
SFP1 <424..491 CDD:227516 33/66 (50%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
ZKSCAN3NP_077819.2 SCAN 42..154 CDD:128708 17/81 (21%)
KRAB 214..274 CDD:214630 15/61 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..274 13/49 (27%)
zf-C2H2 314..336 CDD:395048 7/21 (33%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 329..351 CDD:463886 11/21 (52%)
zf-C2H2 342..364 CDD:395048 8/21 (38%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
COG5048 <368..515 CDD:227381 46/113 (41%)
C2H2 Zn finger 372..392 CDD:275368 8/19 (42%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 482..502 CDD:275368
zf-C2H2 508..530 CDD:395048
C2H2 Zn finger 510..530 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.