DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and si:dkey-56e3.3

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_005160137.1 Gene:si:dkey-56e3.3 / 797788 ZFINID:ZDB-GENE-050411-91 Length:575 Species:Danio rerio


Alignment Length:600 Identity:129/600 - (21%)
Similarity:225/600 - (37%) Gaps:163/600 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AATSTQKWIVCRVCLQQPKEPMASIFNDDSEKDLTHMIRECGGVPIKQF-----DHYPD------ 66
            ||:.|..:...|:|.    ..||:|....::  :|.:|.......:.:.     |.|.|      
Zfish     8 AASRTHTFSFGRICF----NTMANIITFQTQ--ITSVIEVLANAAVAEICKLVEDSYADLQLEIS 66

  Fly    67 ------KICEKCFKVL-------------------------------KMAFKFRETC---QRSYG 91
                  .:.:|..|::                               :::.|....|   ....|
Zfish    67 QTQKENSLLKKRLKMIEIRDSFYRRANKLRNESTALNKTSVREKQSGRISVKVSSVCSGANHEEG 131

  Fly    92 HLRQFVGPV-EVEQRPPEKKGSETATKLEPDVDPDEAEQEPEH---DEEDEDVDLDESHYAEADD 152
            |:|.....| :.:||..::...::....||||...: |:.||:   ::.:.:....|:|   .|:
Zfish   132 HVRSSNSSVLQQQQRLDQQAYHQSVEDGEPDVLIIK-EERPENTRCEQSEREKQTTENH---KDE 192

  Fly   153 AAETQGGVF---HDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGD--LIPDQGY 212
            |.....||.   |.|      ..::::.:.|...|.|.:|             |.|  :|.::..
Zfish   193 ALNKSSGVCVAGHRE------NFIDQNTVQHCHQEPVADD-------------ESDVIIIKEERP 238

  Fly   213 DHEMADQALSELSA------------------EIEYLDQ--VEHDQLTESAHEDDAEVDLNSTEE 257
            |:...:::.:||:|                  ...|:||  |:|      .|::...:..:..::
Zfish   239 DNMRCERSETELNATNNNGTQYGSAGVFVPVHRESYIDQDTVQH------CHQESDAIQPDLLQD 297

  Fly   258 EFVPSKSVRASIHARNATKR-----------RVNPRRSATSTASVAVESS------TSKTTDRG- 304
            |.....::....|..|...|           .:.|..|..|..|...::|      |....:.| 
Zfish   298 ENTEVNAIDEDTHLLNGDTRMERRCDGEVDSNLQPVSSYASWVSRRFDASANHPSYTESECNGGP 362

  Fly   305 --NPLKVRRGNSDSAGSKMSIKSEKDISIGEV---LARKHSGIKTKGGHKILLGDKKEF------ 358
              |...:.||::|...|..:..:...:|:..:   |...:.|       .|...::..|      
Zfish   363 SVNQYLMYRGSTDPMCSYATPINSNSLSVSNIEGHLTHDNEG-------NISQSEQPPFTPCFSF 420

  Fly   359 ------------KYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHT 411
                        :::|..||.::.....|..|.|:|:..:.|.|.:||..|:||..|.||.:.|.
Zfish   421 KQSDSPHMQRKDRFMCKHCGKVFSQPGTLLLHQKLHTRERLHNCTLCGKRFSQASSLKRHHSIHR 485

  Fly   412 GNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDV 476
            |.:|::|.:|...|:|.|...||..:||.|:||.|.:|.|.|..::.||.|..|||.|||..||.
Zfish   486 GEKPFRCQHCGKHFSDQSNLKKHVTVHTGEKPYGCSLCGKMFNQSSNLKTHMKIHTREKPFGCDR 550

  Fly   477 CGKGFPQAYKLRNHR 491
            ||:.|...|.|..|:
Zfish   551 CGRMFAHKYILVKHQ 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 16/123 (13%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 9/23 (39%)
COG5048 386..>447 CDD:227381 25/60 (42%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
zf-H2C2_2 403..426 CDD:290200 8/22 (36%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-H2C2_2 432..455 CDD:290200 11/22 (50%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
zf-H2C2_2 459..481 CDD:290200 13/21 (62%)
C2H2 Zn finger 474..494 CDD:275368 8/17 (47%)
si:dkey-56e3.3XP_005160137.1 COG5048 <328..553 CDD:227381 65/231 (28%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..484 CDD:275368 9/19 (47%)
zf-H2C2_2 476..500 CDD:290200 8/23 (35%)
zf-C2H2 490..512 CDD:278523 7/21 (33%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
zf-C2H2 520..540 CDD:278523 7/19 (37%)
zf-H2C2_2 532..557 CDD:290200 14/24 (58%)
C2H2 Zn finger 548..565 CDD:275368 7/16 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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