DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4936 and Zkscan1

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_598667.2 Gene:Zkscan1 / 74570 MGIID:1921820 Length:561 Species:Mus musculus


Alignment Length:484 Identity:124/484 - (25%)
Similarity:192/484 - (39%) Gaps:96/484 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LRQFVG--PVEV-----EQRPPEKKGSETATKLEPDVDPDEAEQE-------PEH--------DE 135
            |.||:.  |.|:     |.||  ..|.|..|.|| |::.|.:.|:       ||.        |.
Mouse   101 LEQFLSILPKELQVWLQEYRP--DSGEEAVTLLE-DLELDLSGQQVPGQVHGPEMLARGVVPLDP 162

  Fly   136 EDEDVDLD-----ESHYAEAD---------------DAAETQGGVFHDEIEDGILVELEKDRIVH 180
            ..|....|     :||:..:.               .|...:|......:...:|.   .|....
Mouse   163 VQESSSFDHHETAQSHFKHSSRKPRLLSRALPATHVPAPHHEGNPRDQAMASALLT---ADSQAM 224

  Fly   181 VKNEQVEEDGIIEE-----------VYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEYLDQV 234
            ||.|.:....|:||           ..|..:...|::. .||.::...:::.|:  ||::. |..
Mouse   225 VKIEDMAVSLILEEWGCQNLARRNLNRDSRQMNLGNVF-SQGSENRNGNESTSK--AEVKE-DST 285

  Fly   235 EHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSK 299
            .|.::.            ...::||...:..:..:..|..........:..........:.....
Mouse   286 SHGEIA------------GRFQKEFGEKREQQGRVVERQQKNPEEKTGKEKKEPGPPTAKEKKPS 338

  Fly   300 TTDRGNPLKVRRG-----------NSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKIL-L 352
            |.:|| |.:..:|           |:....:....|:.:....|:...|..|.|:    |||: .
Mouse   339 TGERG-PREKGKGLGRSFSLSANFNNTPEEAPSGAKTHRCDECGKCFTRSSSLIR----HKIIHT 398

  Fly   353 GDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYK 417
            |:|   .|.|:.||..:...|.|..|.::|:|.|||||..||..|:.:..|..|...|:|.:||:
Mouse   399 GEK---PYECNECGKAFSLNSNLVLHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHSGEKPYE 460

  Fly   418 CSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFP 482
            |:.|..||:..|...||.||||.|:||||..|.|.|...:.|..|:.|||.|||:.|..|||.|.
Mouse   461 CNECGKAFSQSSDLTKHQRIHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYKCTKCGKAFT 525

  Fly   483 QAYKLRNHRVIHERRGQSARESVAGLVSY 511
            ::..|..|..||.|. :::..|.|.|.::
Mouse   526 RSSTLTLHHRIHARE-RTSEYSPASLDAF 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 1/1 (100%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 12/23 (52%)
COG5048 386..>447 CDD:227381 29/60 (48%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
zf-H2C2_2 432..455 CDD:290200 14/22 (64%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 459..481 CDD:290200 12/21 (57%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
Zkscan1NP_598667.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
SCAN 52..162 CDD:128708 18/63 (29%)
SCAN 52..129 CDD:280241 10/29 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..187 4/23 (17%)
KRAB 225..263 CDD:279668 8/38 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..372 16/128 (13%)
COG5048 <354..535 CDD:227381 68/187 (36%)
zf-C2H2 375..397 CDD:278523 7/25 (28%)
C2H2 Zn finger 377..397 CDD:275368 7/23 (30%)
zf-H2C2_2 389..413 CDD:290200 11/30 (37%)
C2H2 Zn finger 405..425 CDD:275368 6/19 (32%)
zf-H2C2_2 417..442 CDD:290200 12/24 (50%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
zf-H2C2_2 445..470 CDD:290200 10/24 (42%)
C2H2 Zn finger 461..481 CDD:275368 8/19 (42%)
zf-H2C2_2 473..498 CDD:290200 14/24 (58%)
C2H2 Zn finger 489..509 CDD:275368 6/19 (32%)
zf-H2C2_2 501..526 CDD:290200 13/24 (54%)
C2H2 Zn finger 517..537 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.