DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and Zkscan14

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_075811.2 Gene:Zkscan14 / 67235 MGIID:1914485 Length:521 Species:Mus musculus


Alignment Length:499 Identity:123/499 - (24%)
Similarity:182/499 - (36%) Gaps:109/499 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ETCQRSYGHLR--QFVGPVEVEQR---------PPEKKGSET----------ATKLEPDVDPDEA 127
            ||.::.:..||  :..||.|...|         .||....|.          .|.|..::.....
Mouse    41 ETSRKQFRQLRYQEVAGPEEALSRLWELCRRWLRPELLSKEQIMELLVLEQFLTILPQELQAYVR 105

  Fly   128 EQEPEHDEEDEDVDLDESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVK----NEQVEE 188
            :..||..||...:   ......|.|.|..||.:...::.:.:..| |.:::...:    .|..::
Mouse   106 DHSPESGEEAAAL---ARTLQRALDRASPQGFMTFKDVAESLTWE-EWEQLAAARKGFCEESTKD 166

  Fly   189 DGIIEEVYDVYE--TYEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVD 251
            .|  ..|....|  |...|:|..|....|...||         :|.:|....:.......|...|
Mouse   167 AG--STVVPGLETRTVNTDVILKQEILKEAEPQA---------WLQEVSQGMVPALTKCGDPSED 220

  Fly   252 LNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTA---SVAVESSTSKTTDRGNPLKVRRG- 312
            .    ||.:|..:|...:.......|...|.....|..   |...||..|.::..|..::...| 
Mouse   221 W----EEKLPKAAVLLQLQGSEEQGRTAIPLLIGVSREERDSKNNESENSGSSVLGQHIQTAEGL 281

  Fly   313 --NSDSAGSKM--------SIK--SEKDISIGEVLARK-------------HSGIKTKGG----H 348
              ||.......        |:|  |..|.::|.:..::             ..|.:.:..    .
Mouse   282 GTNSQCGDDHKQGFHVKCHSVKPHSSVDSAVGLLETQRQFQEDKPYKCDSCEKGFRQRSDLFKHQ 346

  Fly   349 KILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHT-- 411
            :|..|:|   .|.|..||..:...:.|.:|.:.|:|.||:.|..||.||.|:..|:||..||.  
Mouse   347 RIHTGEK---PYQCQECGKRFSQSAALVKHQRTHTGEKPYACPECGECFRQSSHLSRHQRTHASE 408

  Fly   412 -------------------------GNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHK 451
                                     |.|||||..|..:|...|...||.|.||.|:||.|.||.:
Mouse   409 KYYKCEECGEIVHVSSLFRHQRLHRGERPYKCGDCEKSFRQRSDLFKHQRTHTGEKPYACVVCGR 473

  Fly   452 TFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHE 495
            .|:.:.||..|:..||||||:.|..||:.|.|:..|..|:.||:
Mouse   474 RFSQSATLIKHQRTHTGEKPYKCFQCGERFRQSTHLVRHQRIHQ 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871 4/12 (33%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 30/87 (34%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
SFP1 <424..491 CDD:227516 29/66 (44%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
Zkscan14NP_075811.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 2/3 (67%)
SCAN 40..151 CDD:128708 24/113 (21%)
KRAB 135..193 CDD:214630 10/60 (17%)
COG5048 <303..484 CDD:227381 52/183 (28%)
C2H2 Zn finger 329..349 CDD:275368 1/19 (5%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..405 CDD:275368 9/19 (47%)
C2H2 Zn finger 440..460 CDD:275368 7/19 (37%)
C2H2 Zn finger 468..488 CDD:275368 7/19 (37%)
zf-H2C2_2 481..505 CDD:463886 12/23 (52%)
C2H2 Zn finger 496..516 CDD:275368 7/19 (37%)

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