DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment idc and zgc:113377

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_009291587.2 Gene:zgc:113377 / 568840 ZFINID:ZDB-GENE-050913-148 Length:315 Species:Danio rerio


Alignment Length:190 Identity:67/190 - (35%)
Similarity:91/190 - (47%) Gaps:20/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 RRGNSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSR 374
            |..|.|..|......|:         .:.|..:.|           ||..|.|..||..:..||.
Zfish   144 RPHNCDQCGKTFMRSSQ---------LKMHLRVHT-----------KEKPYSCSECGKSFTQQSN 188

  Fly   375 LTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHT 439
            |.:|.|:|:|:|.|.|..|...|..|.||.:|...|||.:||.||:|...|....:...|..|||
Zfish   189 LRKHQKIHTGLKEHMCLECQQTFVTAGQLKQHQRIHTGEKPYTCSHCKKRFNQSGSLKTHQMIHT 253

  Fly   440 NERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHERRGQ 499
            .|:||:|..|:|.|:.:.::|.|:.|||||||:.||.|.|.|...::...|..||:...|
Zfish   254 GEKPYKCSHCNKRFSQSGSMKAHERIHTGEKPYTCDQCLKSFTHLFQRNKHMKIHKGEKQ 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
COG5048 386..>447 CDD:227381 25/60 (42%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
SFP1 <424..491 CDD:227516 26/66 (39%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..494 CDD:275368 6/19 (32%)
zgc:113377XP_009291587.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.