DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and si:ch211-241e1.5

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001119897.1 Gene:si:ch211-241e1.5 / 567583 ZFINID:ZDB-GENE-030131-6298 Length:542 Species:Danio rerio


Alignment Length:303 Identity:73/303 - (24%)
Similarity:106/303 - (34%) Gaps:92/303 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 EEVYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEE 257
            ||..||:       |||   ...:.|:   |...:|:.....|..|..:...||         ||
Zfish    19 EECEDVH-------IPD---PCTVKDE---ETEEQIDCTPVKEETQDVKDEEED---------EE 61

  Fly   258 EFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMS 322
            :.:..:|.:.|:.......:|...||                                       
Zfish    62 QLIDPESTQTSLSCTETHNKRFKRRR--------------------------------------- 87

  Fly   323 IKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKP 387
                               ::||.|.|            |..||..:..:..|..|:::|:|..|
Zfish    88 -------------------LQTKPGFK------------CSQCGKSFSREGHLESHMRIHTGETP 121

  Fly   388 HECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKT 452
            ..|:.||..|.|...|..||..|:|..|::|..|..:|........|.||||.|.|:.|..|.|:
Zfish   122 FTCKQCGKRFNQKGNLYSHMKIHSGESPFRCQQCGKSFNQKGNLKLHMRIHTGECPFTCKHCDKS 186

  Fly   453 FTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHE 495
            |:....|..|...|:||:...|..|||.|.|...|::|..:||
Zfish   187 FSLKGNLMNHMKTHSGERSFACRRCGKSFTQNKTLKSHMKVHE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 22/60 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
SFP1 <424..491 CDD:227516 24/66 (36%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
si:ch211-241e1.5NP_001119897.1 COG5048 <94..252 CDD:227381 49/148 (33%)
C2H2 Zn finger 96..116 CDD:275368 5/19 (26%)
C2H2 Zn finger 124..144 CDD:275368 8/19 (42%)
C2H2 Zn finger 152..172 CDD:275368 5/19 (26%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
C2H2 Zn finger 287..307 CDD:275368
SFP1 <309..398 CDD:227516
C2H2 Zn finger 315..335 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 419..436 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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