DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and si:dkeyp-53d3.5

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001038477.1 Gene:si:dkeyp-53d3.5 / 563210 ZFINID:ZDB-GENE-050208-485 Length:273 Species:Danio rerio


Alignment Length:156 Identity:54/156 - (34%)
Similarity:77/156 - (49%) Gaps:15/156 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 KKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCS 419
            :|:..:.|..||..:..|..|..|:.:|:..||:.|..|...|..|:.:..|..||||.:||.|:
Zfish    54 RKKSPFTCYRCGKSFRVQYNLKLHMWIHTSKKPYYCSYCTKGFLHAEHVILHERTHTGEKPYHCT 118

  Fly   420 YCPAAFADLS-----TRNKHHRI----------HTNERPYECDVCHKTFTYTNTLKFHKMIHTGE 469
            .|...|...|     |:|.|:::          .|.::||.|..|.|:|.....||.|:.||||.
Zfish   119 VCGTRFTSPSSLRTHTKNLHNQMVKKEESEDLKDTVKKPYSCSECEKSFICEPYLKAHQKIHTGL 183

  Fly   470 KPHVCDVCGKGFPQAYKLRNHRVIHE 495
            |||||..|.|.|.::..||.|...|:
Zfish   184 KPHVCFQCEKAFTRSGDLRRHERTHD 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
COG5048 386..>447 CDD:227381 23/75 (31%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 418..438 CDD:275368 7/34 (21%)
SFP1 <424..491 CDD:227516 29/81 (36%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
si:dkeyp-53d3.5NP_001038477.1 SFP1 <14..138 CDD:227516 27/83 (33%)
C2H2 Zn finger 61..81 CDD:275368 6/19 (32%)
COG5048 83..>141 CDD:227381 20/57 (35%)
C2H2 Zn finger 89..109 CDD:275368 5/19 (26%)
SFP1 <111..178 CDD:227516 20/66 (30%)
C2H2 Zn finger 117..135 CDD:275368 4/17 (24%)
COG5048 155..>209 CDD:227381 24/53 (45%)
C2H2 Zn finger 160..180 CDD:275368 7/19 (37%)
C2H2 Zn finger 188..208 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368
C2H2 Zn finger 244..264 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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