DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and zgc:113090

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001018548.1 Gene:zgc:113090 / 553741 ZFINID:ZDB-GENE-050522-532 Length:343 Species:Danio rerio


Alignment Length:320 Identity:77/320 - (24%)
Similarity:117/320 - (36%) Gaps:79/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 HVKNEQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQL----- 239
            |:|.:|.:||.|                     .||  |.|:||   ||:..|:..|..|     
Zfish    69 HLKEDQAQEDLI---------------------SHE--DSAVSE---EIKLTDEPAHISLVLDET 107

  Fly   240 -TESAH---EDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKT 300
             ..|.|   :...|...|:..    |...|:.|..:|.:.....:.:..||.|...   |:|.|.
Zfish   108 PVNSQHHSLQATCEYSFNNQR----PLSRVKTSSSSRISNSSSGSRKTPATETPRA---SNTIKL 165

  Fly   301 TDRGNPLKV-RRGNSDSAGSKMSIKSEKDISIGEVLARKH----------SGIKTKGGHKILLGD 354
            ..:..||:. ..|::|...:...:.....   |...|.:|          :.|.....||.:.  
Zfish   166 ESKPEPLECPLTGDADHVPTPAPVVVPVQ---GAAFAEEHIQQPASSIPNNIIHFSQPHKPVR-- 225

  Fly   355 KKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKP----------HECEICGHCFAQAQQLARHMNT 409
                      |.:.:..:||:.:.:....|...          |.|.:||..||....|..|...
Zfish   226 ----------CASKHVLRSRVKKMVDAQGGRSAVSISTSREMLHSCHLCGKTFASPSSLGAHFVC 280

  Fly   410 HTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFH-KMIHTG 468
            |:..||:.|.||...|:.|:...||.:|||.|:||.|.:|.:.|.....||.| :.:|.|
Zfish   281 HSNERPFGCKYCKFRFSRLADLKKHEQIHTGEKPYHCSLCGRRFNRRENLKRHLRKVHYG 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 3/19 (16%)
COG5048 386..>447 CDD:227381 24/70 (34%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
SFP1 <424..491 CDD:227516 18/46 (39%)
C2H2 Zn finger 446..466 CDD:275368 6/20 (30%)
C2H2 Zn finger 474..494 CDD:275368
zgc:113090NP_001018548.1 EMC3_TMCO1 11..>76 CDD:473210 3/6 (50%)
C2H2 Zn finger 261..281 CDD:275368 7/19 (37%)
COG5048 285..>340 CDD:227381 22/54 (41%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..335 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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