DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and zgc:110249

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_021326434.1 Gene:zgc:110249 / 553601 ZFINID:ZDB-GENE-050522-331 Length:308 Species:Danio rerio


Alignment Length:313 Identity:95/313 - (30%)
Similarity:133/313 - (42%) Gaps:53/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 DHEMADQALSELSAEIEYLDQVEHDQL----------TESA--HEDDAEVDLNSTEEEFVPSKSV 265
            |.:..:|  ::||.|.|   :.|.|:|          ||.|  ..|...:..:...:.....||:
Zfish    11 DEDTEEQ--TDLSEESE---ESEDDELLKAEKTPHLQTEDALMQRDKKCLTCSQCGKSLANKKSL 70

  Fly   266 --RASIHAR----NATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRR-GNSDSAGSKMSI 323
              ...||..    ..|:...:.|.|.:.|..:.:.:..       ||..... |.|....|  |:
Zfish    71 SQHMMIHTGEKPFTCTQCGTSFRHSLSLTKHMMIHTGE-------NPFSCTHCGKSFRLSS--SL 126

  Fly   324 KSEKDISIGEVLARKH------------SGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLT 376
            |....|..||   |||            |.:|     :.|....||..|.|..||..:.:||.|.
Zfish   127 KEHMMIHTGE---RKHKCDQCSRAFFRASTLK-----RHLKTHTKEKPYSCSECGKRFTTQSNLK 183

  Fly   377 EHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNE 441
            :|.|:|:|||.:.|..|...|.:.:.|..|...|||.:|||||||...||.|..:..|.|.||.|
Zfish   184 QHQKIHTGVKEYMCFDCEKTFIKPEHLKLHQRIHTGEKPYKCSYCDKRFAHLEYQKLHERTHTGE 248

  Fly   442 RPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH 494
            :||:|..|.|.|........|:.|||.|||:.||.|.:.|..:.:|:.|..:|
Zfish   249 KPYKCSHCDKRFRSLAHRNRHQKIHTREKPYSCDQCLERFTHSVQLKKHLKVH 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 26/60 (43%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 12/22 (55%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
zf-H2C2_2 432..455 CDD:290200 11/22 (50%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
zf-H2C2_2 459..481 CDD:290200 10/21 (48%)
C2H2 Zn finger 474..494 CDD:275368 6/19 (32%)
zgc:110249XP_021326434.1 C2H2 Zn finger 57..77 CDD:275368 2/19 (11%)
C2H2 Zn finger 85..105 CDD:275368 4/19 (21%)
C2H2 Zn finger 113..133 CDD:275368 5/21 (24%)
COG5048 <138..300 CDD:227381 62/166 (37%)
C2H2 Zn finger 141..161 CDD:275368 3/24 (13%)
C2H2 Zn finger 169..189 CDD:275368 8/19 (42%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
C2H2 Zn finger 225..245 CDD:275368 9/19 (47%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581056
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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