DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and Zscan4d

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001093656.1 Gene:Zscan4d / 545913 MGIID:3645954 Length:506 Species:Mus musculus


Alignment Length:535 Identity:116/535 - (21%)
Similarity:186/535 - (34%) Gaps:147/535 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 STQK----WIVCRVCLQ---QPKEPMASIFNDDSEKDLTHMIRECGGVPIKQF---DHYPDKICE 70
            :||:    |.:....||   |.||.|.|                  .:.::||   .|..||   
Mouse    51 ATQELQSLWKMFNSWLQPEKQTKEQMIS------------------QLVLEQFLLIGHCKDK--- 94

  Fly    71 KCFKVLKMAFKFRETCQRSYGHLRQFV---------GPVEV------------EQRPPEK----- 109
                     :...|..:.|...:|:|:         .||.|            |..|.::     
Mouse    95 ---------YALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLL 150

  Fly   110 KGSETATKLEPD-----VDPDEAEQEPEHDEEDEDVDLDESHYAEADDAAETQGGVFHDEIEDGI 169
            |..::||:..||     ||..:........|..|:...:..:..||:......|.          
Mouse   151 KQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGN---------- 205

  Fly   170 LVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAEIEY---- 230
                |.|.::.::.||          |..:|  ||:::.....|...|.|..|  |..:::    
Mouse   206 ----EMDSLLIIQKEQ----------YPEHE--EGNVVFQFPLDARRASQGNS--SHHVDFRSAP 252

  Fly   231 ------LDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTA 289
                  :::...|...|:..||              .:.....|.:|.....|..|..|..|.:.
Mouse   253 TPADVPMEEQPKDLSRENISED--------------KNNCYNTSRNAATQVYRSDNIPRKKTDSL 303

  Fly   290 SVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLARKH----SGIKTKG---- 346
            |:......|:..:...|..|.:   ||..:.....:....|:||..:.|.    .|::::.    
Mouse   304 SINKRIYHSEPEEGDIPYGVPQ---DSTRASQGTSTCLQESLGECFSEKDPRELPGLESRQEEPI 365

  Fly   347 GHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHT 411
            ...:.||...|....|:      ..|.|.....|:      .:||.|...|..|:.|:.|..||.
Mouse   366 SDPVFLGKDHEANLPCE------SHQKRFRRDAKL------FKCEECSRMFKHARSLSSHQRTHL 418

  Fly   412 GNR-PYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCD 475
            ..: ...|..|...|..:|.|..|..||..|:|::|..|.|:|::...||.|:||||||.|:||.
Mouse   419 NKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCS 483

  Fly   476 VCGKGFPQAYKLRNH 490
            :|.:.|.|:.....|
Mouse   484 LCSRRFRQSSTYHRH 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 14/78 (18%)
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
zf-H2C2_2 375..399 CDD:290200 5/23 (22%)
COG5048 386..>447 CDD:227381 19/61 (31%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 6/23 (26%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 9/22 (41%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
zf-H2C2_2 459..481 CDD:290200 13/21 (62%)
C2H2 Zn finger 474..494 CDD:275368 5/17 (29%)
Zscan4dNP_001093656.1 SCAN <51..117 CDD:295388 19/95 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..264 3/27 (11%)
zf-C2H2 395..417 CDD:278523 7/21 (33%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
zf-H2C2_2 438..463 CDD:290200 10/24 (42%)
C2H2 Zn finger 454..474 CDD:275368 8/19 (42%)
zf-H2C2_2 466..491 CDD:290200 14/24 (58%)
C2H2 Zn finger 482..500 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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