DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and si:rp71-1h20.5

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_073790613.1 Gene:si:rp71-1h20.5 / 541434 ZFINID:ZDB-GENE-030131-7869 Length:373 Species:Danio rerio


Alignment Length:324 Identity:92/324 - (28%)
Similarity:132/324 - (40%) Gaps:71/324 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 EIEYLDQVEH--DQLTESAHEDDAEVDLNSTE-EEFVPSKSVRASIHARNATKRRVNPRRSATST 288
            |:|.|.|..|  ::...:|.:|..:..:.:.| :|.........|...:::.|:.::........
Zfish    23 EVEELKQPHHFKNEDANAAEQDFTQKQVQTAEAKELFACSECGKSYTYKSSLKKHMSAHSGEKLF 87

  Fly   289 ASVAVESSTSKTTDRGNPLKVRRGN-----SDSAGS---KMSIKSEKDISIGE------------ 333
            |......|....:|.....||..|:     |:...|   |..:|....|..||            
Zfish    88 ACTQCGKSYMYKSDLNRHFKVHNGDRPYICSECGSSFIYKGHLKEHMKIHSGEKPFTCAQCGNSF 152

  Fly   334 -----------------VLARKHSGIK-TKGGH-----KILLGDK--------KEFKY------- 360
                             :....|.|.| |:.||     ::...||        |.|||       
Zfish   153 MYNKDLNAHMKIHSGEDMFECTHCGKKFTRKGHLNVHLRVHTEDKPFACAECGKSFKYKSVLNNH 217

  Fly   361 ----------ICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRP 415
                      .||.||..:...|.|..|:|||:||||:.|..||..|.....|..|.:||||.:|
Zfish   218 LHTHAEVKSFSCDQCGKSFVCASNLRTHLKVHTGVKPYICAFCGKKFLHMSYLKLHQHTHTGVKP 282

  Fly   416 YKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGK 479
            :.||.|..:|..||...||.||||.|:||.|..|.|:|:.::.:|.|:.|||||||:.|..||:
Zfish   283 HACSVCGKSFGLLSNLKKHQRIHTGEKPYMCSHCGKSFSCSSAVKAHERIHTGEKPYPCSSCGR 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
COG5048 386..>447 CDD:227381 28/60 (47%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
SFP1 <424..491 CDD:227516 28/56 (50%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..494 CDD:275368 3/6 (50%)
si:rp71-1h20.5XP_073790613.1 None
Blue background indicates that the domain is not in the aligned region.

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