DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and zgc:113348

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001013305.1 Gene:zgc:113348 / 503599 ZFINID:ZDB-GENE-050227-10 Length:338 Species:Danio rerio


Alignment Length:378 Identity:94/378 - (24%)
Similarity:149/378 - (39%) Gaps:90/378 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EAEQEPEHDEEDEDVDLDESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDG 190
            |.|:||...:|||...:.|.   |.::..:.:|..|..:.|:|           :..:.|.|   
Zfish     2 EIEEEPCTIQEDEPFMIKEE---ETEELIDEEGYTFSSQTEEG-----------YTFSSQTE--- 49

  Fly   191 IIEEVYDVYETYEGDL-----IPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEV 250
                     .|:...:     .|:.|..::..|    .||..::             .|      
Zfish    50 ---------PTFRQKMSGCFCCPECGKCYKYKD----SLSRHMK-------------VH------ 82

  Fly   251 DLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGN-- 313
                |.|......|...|...:.|.:..:.........|......|.::.||....:::..|.  
Zfish    83 ----TGEGLFTCISCGKSYTEKGALESHMRFHTGEKPFACTLCGQSYTRKTDLKRHMRIHSGERP 143

  Fly   314 ------SDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQ 372
                  ..|..||..:|..        |:| |.|:|.               :.||.|...:.:.
Zfish   144 YKCPQCEQSFTSKNVLKDH--------LSR-HIGVKA---------------FSCDQCDKTFVTA 184

  Fly   373 SRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRI 437
            |.|.:|:|||:|.|||.|.:|..||::.:.|..|:..|||.:|:.||.|..:|...|....|.:.
Zfish   185 SNLRKHLKVHTGEKPHLCTLCKKCFSRPEHLQVHLYIHTGVKPHVCSDCGKSFKTPSNLKSHQKT 249

  Fly   438 HTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNH 490
            |:.|:|::|..|.|:||:...||:|:.:||||||:.|..|||.|.....:|.|
Zfish   250 HSGEKPFKCSHCEKSFTFPGNLKYHERVHTGEKPYKCSTCGKSFGFLANVRAH 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
COG5048 386..>447 CDD:227381 22/60 (37%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 27/67 (40%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 7/17 (41%)
zgc:113348NP_001013305.1 SFP1 <50..139 CDD:227516 16/115 (14%)
C2H2 Zn finger 62..82 CDD:275368 5/36 (14%)
C2H2 Zn finger 90..110 CDD:275368 3/19 (16%)
COG5048 <114..265 CDD:227381 49/174 (28%)
C2H2 Zn finger 118..138 CDD:275368 3/19 (16%)
C2H2 Zn finger 146..166 CDD:275368 6/28 (21%)
C2H2 Zn finger 174..194 CDD:275368 7/19 (37%)
C2H2 Zn finger 202..222 CDD:275368 6/19 (32%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
zf-H2C2_2 270..293 CDD:463886 13/22 (59%)
C2H2 Zn finger 286..304 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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