DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and Zfp202

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001102760.1 Gene:Zfp202 / 500981 RGDID:1562294 Length:643 Species:Rattus norvegicus


Alignment Length:657 Identity:151/657 - (22%)
Similarity:213/657 - (32%) Gaps:250/657 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EKDLTHMIRECGGVPIKQFDHYPDKICE------KCFKVLKMA------FKFRETC-------QR 88
            |.|.|     ||.....|.|   |.:.|      :||:..:.:      .:.||.|       :|
  Rat    26 EDDFT-----CGPESALQGD---DPVLETSHQNFRCFRYQEASSPREALIRLRELCHQWLRPERR 82

  Fly    89 SYGH------LRQF--VGPVEVE-----QRPPEKKGSETATKLEP-------------------- 120
            :...      |.||  |.|.|::     |||  :.|.|..|.:|.                    
  Rat    83 TKEQILELLVLEQFLTVLPGELQSWVRGQRP--ESGEEAVTLVEGLQKQPRRPRRWVTVHVQGQE 145

  Fly   121 ---------DVDPDEA--EQEP--------EHDE-----------------EDEDVDLDESHYAE 149
                     .|:|:.:  :|||        .|:|                 |.|.:.|.||....
  Rat   146 VLSEETLHLGVEPESSNEQQEPTQTLTAEQPHEEALRSTDLGTLEQESLQHEGERLPLLESEVPV 210

  Fly   150 ADDA-AETQGGVFHDEIEDGILVELE------KDRIVHVKNEQVEE-DGIIEEVYDVYETYEGDL 206
            :..| ..|:.|..|.|:. .:|..|.      ||..:....:|..: |...:|.|..|...|   
  Rat   211 SQHADLPTEQGSGHPEMV-ALLTALSQGLVTFKDVALCFSQDQWSDLDPTQKEFYGEYVLEE--- 271

  Fly   207 IPDQGYDHEMADQALSELSAEIEYLD---QVEHDQ-----LTESAHEDDAEV-------DLNSTE 256
              |.|        .:..||..|..||   |:..::     :.||....:.|:       |::..|
  Rat   272 --DCG--------IVVSLSFPIPRLDDPSQIREEEPQVPGVHESQEPAEPEILSFTYTGDMSEAE 326

  Fly   257 EEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNS-DSAGSK 320
            ||.|..:....||.|        |.....|....:.:|.:||:..:|.. ..|.:.|| .:....
  Rat   327 EECVEQQDTNKSILA--------NTEIHQTPDWEIVIEDNTSRLNERFG-TNVSKVNSFTNIRKT 382

  Fly   321 MSIKSE-----------KDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSR 374
            |.:.|:           |..:....|.|.   ::|..|.|         .|.|..||..|...|.
  Rat   383 MPVHSQSGRQHHCPLCAKSFTCNSHLIRH---LRTHTGEK---------PYKCMECGKSYTRSSH 435

  Fly   375 LTEHIKVH-----------------SGV---------KPHECEICGHCFAQAQQLARHMNTHTGN 413
            |..|.|||                 |.|         ||:.|:.||..|.....|.||..||||.
  Rat   436 LARHQKVHKVNTPHKHPPNRKTVDASQVQSEATTRVEKPYTCDDCGKHFRWTSDLVRHQRTHTGE 500

  Fly   414 RPYKCSYCPAAFADLSTRNKHHRIHTNERPY---------------------------------- 444
            :|:.|:.|..:|:..|....|.|||...:||                                  
  Rat   501 KPFFCTICGKSFSQKSVLTTHQRIHVGGKPYTCANCGENFSEQKQYLAHRKTHVSEENHLCSECG 565

  Fly   445 ----------------------ECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKL 487
                                  .||.|.|:|:..:.|..|:..||||||..|..|||.|.:.|.|
  Rat   566 RSFNHSAAFAKHLKGHASVRNCRCDECGKSFSRRDHLVRHQRTHTGEKPFTCATCGKSFSRGYHL 630

  Fly   488 RNHRVIH 494
            ..|:.||
  Rat   631 IRHQRIH 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871 16/76 (21%)
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
COG5048 386..>447 CDD:227381 24/116 (21%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 28/122 (23%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
Zfp202NP_001102760.1 SCAN 45..155 CDD:128708 20/111 (18%)
KRAB 239..299 CDD:214630 16/72 (22%)
COG5048 <334..626 CDD:227381 75/312 (24%)
C2H2 Zn finger 395..415 CDD:275368 3/22 (14%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..525 CDD:275368 6/19 (32%)
C2H2 Zn finger 533..553 CDD:275368 0/19 (0%)
C2H2 Zn finger 561..581 CDD:275368 0/19 (0%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
C2H2 Zn finger 617..637 CDD:275368 8/19 (42%)

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