DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG1792

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster


Alignment Length:302 Identity:81/302 - (26%)
Similarity:129/302 - (42%) Gaps:56/302 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSAT 286
            :|...|||.:|.:..:.|.|...|.....:.|...:..||::..:.              |||..
  Fly   104 AEEVTEIEVIDLLPEEHLLEETEEPYEICEQNEQPQVKVPAQEKKL--------------RRSTK 154

  Fly   287 STASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKIL 351
            :|.:|   .::.|..|          ||.:..::.|..:|     .||:|.|.            
  Fly   155 TTPTV---FTSVKFAD----------NSQATRTQWSRLTE-----DEVVALKR------------ 189

  Fly   352 LGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPY 416
              ::::...||:.||..:...|....|:..|:|||...|:.|...|..|..|.||...|.||..:
  Fly   190 --ERRKRDCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQELHAGNALF 252

  Fly   417 KCSYCPAAFADLSTRNKHHRI-HTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKG 480
            :|.||.|.:::.|.|.:|.|: |||.:|:.|..|:|:|..:..|:.|.:.|||.:...||.|...
  Fly   253 QCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVS 317

  Fly   481 FPQAYKLRNHRVIHER-RGQSARESVAGLVSYDTANIVGLDM 521
            |.:    |:|...|.| :|.:...|....:.    |.|.||:
  Fly   318 FVR----RSHLTSHYRSKGHAHTSSAQAALD----NPVELDV 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
zf-H2C2_2 375..399 CDD:290200 8/23 (35%)
COG5048 386..>447 CDD:227381 23/61 (38%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 10/22 (45%)
C2H2 Zn finger 418..438 CDD:275368 8/20 (40%)
zf-H2C2_2 432..455 CDD:290200 10/23 (43%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 459..481 CDD:290200 8/21 (38%)
C2H2 Zn finger 474..494 CDD:275368 6/19 (32%)
CG1792NP_651878.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..243 CDD:275368 6/16 (38%)
C2H2 Zn finger 254..275 CDD:275368 8/20 (40%)
zf-C2H2 281..303 CDD:278523 6/21 (29%)
C2H2 Zn finger 283..303 CDD:275368 6/19 (32%)
zf-H2C2_2 296..320 CDD:290200 9/23 (39%)
C2H2 Zn finger 311..329 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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