DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG4424

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:478 Identity:123/478 - (25%)
Similarity:166/478 - (34%) Gaps:179/478 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VCRVCLQQPKEPMASIFNDDSEK-----DLTHMIRECGGVPIK---QFDHYPDKICEKCFKVLKM 78
            :||.|||..:..|.|||....::     .|...|....|:.|:   :.:..|.:||.:|...|.:
  Fly    10 LCRTCLQDGEAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKAFLTL 74

  Fly    79 AFKFRETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDVDPDEAEQ-EPEHDEEDEDVDL 142
            |.|||:.||||...||::|....|||...::...:|.....|   |.|.|| ||..||.     |
  Fly    75 AHKFRQICQRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPP---PIETEQLEPPEDEV-----L 131

  Fly   143 DESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLI 207
            :|..::..|...||..|.          .|.|:..::.|                          
  Fly   132 EEGVWSTEDPIEETPHGP----------AEKERPTVLTV-------------------------- 160

  Fly   208 PDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHAR 272
                                                              |.:|:          
  Fly   161 --------------------------------------------------EMLPA---------- 165

  Fly   273 NATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLAR 337
                    |.....||...|                                     ..|.|..:
  Fly   166 --------PYPPPASTPPPA-------------------------------------PAGAVKGK 185

  Fly   338 KHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQ 402
            .|                     :|.:|||.||.:|.|..|::.|:..:|:|||||...|....|
  Fly   186 LH---------------------VCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQ 229

  Fly   403 LARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHT 467
            |.||:..|||.:||.|.||...|||.::..||.|.|.|||||.|..|.|.|||.:.||.|...||
  Fly   230 LKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHT 294

  Fly   468 GEKPHVCDVCGKGFPQAYKLRNH 490
            |||||:|.:|.|.|.:.:.|..|
  Fly   295 GEKPHICQLCNKSFARIHNLVAH 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 27/80 (34%)
C2H2 Zn finger 362..382 CDD:275368 9/19 (47%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 31/60 (52%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
zf-H2C2_2 403..426 CDD:290200 11/22 (50%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
zf-H2C2_2 432..455 CDD:290200 13/22 (59%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
zf-H2C2_2 459..481 CDD:290200 13/21 (62%)
C2H2 Zn finger 474..494 CDD:275368 6/17 (35%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 28/81 (35%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
DUF45 <204..281 CDD:302795 36/76 (47%)
COG5048 210..>345 CDD:227381 53/108 (49%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 14/23 (61%)
C2H2 Zn finger 301..320 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3C1GA
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3338
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.860

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