DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and Zif

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:483 Identity:127/483 - (26%)
Similarity:188/483 - (38%) Gaps:154/483 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 CRVCLQQPKEPMASI--FNDDSEKDLTHMIRECGGVP---IKQFDHYPDKICEKCFKVLKMAFKF 82
            |||||.| .|.:..:  ..::.|:....|:.:..||.   :...:|.||.||:.|...|.||::|
  Fly    10 CRVCLAQ-SERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQF 73

  Fly    83 RETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDVDPDEAEQEPEHDEEDEDVDLDESHY 147
            ||...|.         .:|:|:                                          |
  Fly    74 REKALRK---------QMEIEE------------------------------------------Y 87

  Fly   148 AEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLIPDQGY 212
            ..                |.|:|.|.:   ::.:|.|...:....||:|.:.||..|:....:..
  Fly    88 CR----------------ELGLLDESD---VMMIKEEDGSQQQCDEEMYILEETTTGEEEHQEEK 133

  Fly   213 DHE------MADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEE-EFVPSKSVRASIH 270
            .||      .:||. ..:...||||:    |..|...:.|..|:.|.|.:: |..||:.:.....
  Fly   134 GHEEYLEVDTSDQQ-ECIGDTIEYLE----DNYTIEMNSDQTEIVLESEKQYEETPSQQLALQEA 193

  Fly   271 ARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRG-NS--DSAGSKMSIKSEKDISIG 332
            |:.:.|.|                        ||   :|||| ||  .|.|::            
  Fly   194 AKASLKAR------------------------RG---RVRRGLNSLTTSDGTE------------ 219

  Fly   333 EVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCF 397
                        |||            ||||||||.|..:.|:.||.:.|.|:..:.||:|...|
  Fly   220 ------------KGG------------YICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKF 260

  Fly   398 AQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFH 462
            ...:||.:||.:|||::|||||:|...|...|....|..:|...:||.|.||.|.|.|.::|..|
  Fly   261 QVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKH 325

  Fly   463 KMIHTGEKPHVCDVCGKGFPQAYKLRNH 490
            ::||:..|.:.||.|.|.|...:.:|.|
  Fly   326 ELIHSDIKLYRCDYCNKDFRLLHHMRQH 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871 24/76 (32%)
C2H2 Zn finger 362..382 CDD:275368 10/19 (53%)
COG5048 386..>447 CDD:227381 23/60 (38%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 24/67 (36%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 7/17 (41%)
ZifNP_649657.1 zf-AD 9..87 CDD:462262 26/128 (20%)
C2H2 Zn finger 225..245 CDD:275368 10/19 (53%)
COG5048 <250..369 CDD:227381 41/104 (39%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)

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