DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4936 and CG10321

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001261124.1 Gene:CG10321 / 37464 FlyBaseID:FBgn0034643 Length:855 Species:Drosophila melanogaster


Alignment Length:805 Identity:149/805 - (18%)
Similarity:236/805 - (29%) Gaps:355/805 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VCRVCLQQPKEPMASIFNDDSEKDLTHMIRECGGVPIKQFDHYPDKICEKCFKVLKMAFKFRETC 86
            :||:|:.:.|| |..:|   ||| :..|:.:|..|.::..:.:|||||.:|...:.....|:...
  Fly    12 ICRLCISERKE-MRPLF---SEK-VPEMLMDCTSVRVEPTEGWPDKICVQCVHAVSRNHAFKTLV 71

  Fly    87 QRSYGHLRQFVGPVEV------------------------------------------------E 103
            :||...||:::..:.|                                                :
  Fly    72 ERSDKELREYIRGLTVALVMEEQQQQEAANAKQQLQLERKQQRQLQKQQKILEEQLQQQIVQQQQ 136

  Fly   104 QRPPEK--------KGSETATKLEPDVDP------------------DEAEQEPEHDEEDEDVDL 142
            .:||.|        |||....:...:..|                  :.|.|:|...::.:.:.:
  Fly   137 HQPPAKPKLKPLLRKGSRQQKQRHLEAAPAPQSVPQPAPQPQMQLMQEHAPQQPTMQQQIQQIHM 201

  Fly   143 DESHYAEAD-------------------------------------------------DAAETQG 158
            .....|.|.                                                 .||::| 
  Fly   202 PTLQPAPAQLLSAAGATTTMPQQILLPNGQLITTAQIVAPQLAQIISTAPQSTTNGQATAAQSQ- 265

  Fly   159 GVFHDEI--------------EDGI----LVELEKDRIV-------------------HV----- 181
              |..::              .:|.    ||:|...|.:                   ||     
  Fly   266 --FLPQLLQTPNGQTLQIVQQPNGTQTLQLVQLVPQRSLAPTGVTTVTTTTNATDMGQHVGASLG 328

  Fly   182 -KNEQVEEDGI---IEEVYDVYETYEG---------------------------------DLIPD 209
             .:.|:.|||.   .||:.||||..:.                                 ||...
  Fly   329 DADVQLLEDGCEVEDEELEDVYEQLDSKADHSFETIVLDDDQQQDFLKDHHEHHQVMINEDLTQS 393

  Fly   210 QGYDHEMAD-----QALSELSAEIEYLD-------------QVEHDQLTESAH------------ 244
            :..|||..|     ||:.|:..|.|.:.             |:|.|::.:...            
  Fly   394 ESQDHEYFDDLDQQQAMDEIEDEEEQMKPEEDQDTFIIEEIQLEDDEMLDDPDGEEIDQDCEYIG 458

  Fly   245 -----------EDDAE------------VDLNST-----------EEEFVPSKSVRASI----HA 271
                       :||.|            ||::..           .:|.:.|.|:..::    .|
  Fly   459 EEQDPHLSGDVDDDLEYSIMEPPDGETSVDIDQAFMDSEQSHHQQHQEEMQSISLENAVVEFSQA 523

  Fly   272 RNATKRRVNPRRSATSTASVAVESSTSKTTDRGN---PLKVRRGNSD----SAGSKMSIK----- 324
            ...|:..|.|      |.:|:..|.|.|...|.|   |..|.....|    :|||..|.|     
  Fly   524 TTTTEALVGP------TMTVSSASPTPKRAKRSNHQIPAGVTLEPCDHQPPAAGSTTSSKLAAAN 582

  Fly   325 SEKDISIGEVLA-------------------RKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYP 370
            |.:.:....|:|                   |:|:.....|            :|||.:|...:.
  Fly   583 SRQLVQTASVIAAAGADDNYEIDANLVTEFIRQHTSPLGSG------------RYICHLCSTEFR 635

  Fly   371 SQSRLTEHIKVHSG------VKPHECEICGHCFAQAQQLARHMNTH--TGNRPYKCSYCPAAFAD 427
            ....|..|:..|:.      .|..:|:||...|.....|..||.||  ..:.| .|:.|...|..
  Fly   636 QFKGLQNHMHSHTNWIRANCKKQPQCQICLKSFKGPGMLRMHMKTHDAESSTP-MCTICNRTFKS 699

  Fly   428 LSTRNKHHRIHTNERPYECDV--CHKTFTYTNTLKFHKMIHTGEKPH--------VCDVCGKGFP 482
            .:...:|.:.| .:|.|.|.|  |.|.|:....||:|.     |:.|        .|..||..:.
  Fly   700 KAILYRHRQTH-QQRAYCCGVANCRKNFSSAVNLKWHV-----ERKHPEVVDPLFKCGECGSLYD 758

  Fly   483 QAYKLRNHRVIHERRGQSARESVAG 507
            ....|:.|   .|....||...::|
  Fly   759 NVDSLQLH---VESTDHSAEVQISG 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 23/72 (32%)
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
zf-H2C2_2 375..399 CDD:290200 8/29 (28%)
COG5048 386..>447 CDD:227381 18/62 (29%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 8/24 (33%)
C2H2 Zn finger 418..438 CDD:275368 4/19 (21%)
zf-H2C2_2 432..455 CDD:290200 9/24 (38%)
C2H2 Zn finger 446..466 CDD:275368 8/21 (38%)
zf-H2C2_2 459..481 CDD:290200 8/29 (28%)
C2H2 Zn finger 474..494 CDD:275368 5/19 (26%)
CG10321NP_001261124.1 zf-AD 12..80 CDD:214871 23/72 (32%)
ASF1_hist_chap <405..516 CDD:304562 16/110 (15%)
C2H2 Zn finger 627..647 CDD:275368 4/19 (21%)
C2H2 Zn finger 661..681 CDD:275368 7/19 (37%)
C2H2 Zn finger 690..710 CDD:275368 4/19 (21%)
C2H2 Zn finger 717..740 CDD:275368 9/27 (33%)
C2H2 Zn finger 750..767 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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