DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and Zbtb6

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001102423.1 Gene:Zbtb6 / 366029 RGDID:1306007 Length:423 Species:Rattus norvegicus


Alignment Length:404 Identity:86/404 - (21%)
Similarity:147/404 - (36%) Gaps:110/404 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 FVGPVEVEQRPPEK---------------KGSETATK-LEPDVDPDEAEQEPEHDEEDEDVDLDE 144
            :.|.:||:::...|               |.:|..:| ||.|:    :.:..:|.:..:..|.|.
  Rat    89 YTGALEVKRKELLKYLTAASYLQMVHIVEKCTEALSKYLEIDL----SMKNNQHTDLCQSSDTDV 149

  Fly   145 SHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLIPD 209
            .:..|..|             :|..::|:.:|..|::.....||:|  :.:....||...:....
  Rat   150 KNEEENSD-------------KDCEIIEISEDSPVNLDPPVKEEEG--DALQSAAETLTSERRGV 199

  Fly   210 QGYDHEMADQALSE-----LSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASI 269
            :..:....|....|     |..|..:.|.:|:.|..:.....:|.:....|:...:         
  Rat   200 KSPELSTVDGGFKENEICILHVESIHTDDIENGQFPQPCTSSNAGMYFPETQHSVI--------- 255

  Fly   270 HARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRG----NSDSAGSKMSIKSEKDIS 330
               |:|                 ||:..::.     |....:|    |||  ||..:|...:::.
  Rat   256 ---NST-----------------VENRVTEV-----PGNTNQGLFSENSD--GSHGTINEIQNLD 293

  Fly   331 IGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGH 395
              |..:.:|.                     |..|...:........|:|:|   |...|..||.
  Rat   294 --ENFSLRHQ---------------------CPRCPRGFLHVENYLRHLKMH---KLFLCLQCGK 332

  Fly   396 CFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLK 460
            .|.|.:.|.||:..|.|.||::|:.|...|...||...|..||:.:|||:|..|...|.:.:.||
  Rat   333 TFTQKKNLNRHIRGHMGIRPFQCTVCLKTFTAKSTLQDHLNIHSGDRPYKCHCCDMDFKHKSALK 397

  Fly   461 FH-KMIH---TGEK 470
            .| ..:|   :|||
  Rat   398 KHLTSVHGRSSGEK 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
zf-H2C2_2 375..399 CDD:290200 8/23 (35%)
COG5048 386..>447 CDD:227381 24/60 (40%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 9/22 (41%)
C2H2 Zn finger 446..466 CDD:275368 6/20 (30%)
zf-H2C2_2 459..481 CDD:290200 7/16 (44%)
C2H2 Zn finger 474..494 CDD:275368
Zbtb6NP_001102423.1 BTB_POZ_ZBTB6 8..123 CDD:349506 6/33 (18%)
COG5048 <251..>398 CDD:227381 47/208 (23%)
C2H2 Zn finger 302..322 CDD:275368 4/19 (21%)
zf-C2H2 325..347 CDD:395048 8/21 (38%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-H2C2_2 339..363 CDD:404364 9/23 (39%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..400 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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