DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG17568

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:556 Identity:126/556 - (22%)
Similarity:198/556 - (35%) Gaps:162/556 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TSTQKWI-VCRVCLQQPKEPMASI-FNDDSEKD----LTHMIRECGGVPIKQFDHYPDKICEKCF 73
            |....|: .||:|.:........: .|::|:.:    |...||:...|.::..|.....:|.:|:
  Fly     2 TDGSHWLNWCRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECY 66

  Fly    74 KVLKMAFKFRETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDV---------------- 122
            .::.....|.|       |:.:.....||.:|      :||....|.||                
  Fly    67 TLISELIDFAE-------HVTKVQDIFEVLRR------TETDGDQEMDVAALRQQFGLCDDDWTH 118

  Fly   123 ----------DPDEAEQEPEHDEEDEDVDLDESHYAEADDAAETQGGVFH-DEIEDGILVELEKD 176
                      :.|...|:|.  |..:|..|.|:...|.:.:..|.  ..| .:.:..:.:|:.|.
  Fly   119 IIKPIPALEMESDNVYQKPA--ELLKDFPLAETSSQEMEISKRTT--TTHLIQTKKNVEMEIPKQ 179

  Fly   177 RIVHV------KN-EQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAE----IEY 230
            ..:.:      || .|::.:.:::|            :|.:.......|...|..|.|    .|.
  Fly   180 EFIDLGPILLEKNTSQLDMEDVLDE------------LPQEELSQPRLDSTTSPASMENDVKSEM 232

  Fly   231 LDQVEHDQLTESAHEDDAEVD---------------LNSTEEEFVPSKSVRASIHARNATK---- 276
            ||..|.|       :|...||               |.||.||    |:.|..:......|    
  Fly   233 LDSCEGD-------DDFLPVDGQLMDLVAVATTPNTLESTAEE----KAKRGRMDCEKCGKVYRN 286

  Fly   277 ------------RRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDI 329
                        ||:..|        |.|:.:|: |.|..|         .:..|..::|..|: 
  Fly   287 RASYEKHLERECRRIERR--------VKVDKTTT-TCDICN---------KTLSSATALKLHKE- 332

  Fly   330 SIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICG 394
                   ..|..:|               .||||.||....:.:.|.||..||:..:|.||.:|.
  Fly   333 -------GIHQNVK---------------PYICDSCGKQLKTITALNEHKLVHTESRPFECTVCK 375

  Fly   395 HCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTL 459
            ..|....:|..|...| ....:.|:.|........|.|.|..:||.||..:||||...|..:.||
  Fly   376 AGFKNRARLKAHYQIH-AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTL 439

  Fly   460 KFHKMIHTGEKPHVCDVCGKGFP-----QAYKLRNH 490
            |.|.:.|||.:|:||:.|||.|.     :::||:.|
  Fly   440 KTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKH 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 15/77 (19%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 17/60 (28%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 5/22 (23%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
zf-H2C2_2 432..455 CDD:290200 11/22 (50%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
zf-H2C2_2 459..481 CDD:290200 12/21 (57%)
C2H2 Zn finger 474..494 CDD:275368 8/22 (36%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 15/83 (18%)
COG5048 <313..471 CDD:227381 55/190 (29%)
C2H2 Zn finger 314..335 CDD:275368 5/37 (14%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 398..418 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 9/19 (47%)
zf-H2C2_2 439..463 CDD:290200 13/23 (57%)
C2H2 Zn finger 454..475 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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